D. rerio Gene: slc39a4 - ENSDARG00000059361 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059361
Nameslc39a4
Descriptionsolute carrier family 39 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-060315-8]
OrganismDanio rerio (zebrafish)
Synonym(s)zip4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.44e3
  • 7.44e3
  • 2.08e4
75.09
  • 75.09
  • 30.36
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.75
  • 73.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.65
  • 73.65
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.18e4
  • 1.18e4
60.64
  • 60.64
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.51e4
  • 1.51e4
  • 2.07e4
49.57
  • 49.57
  • 30.60
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.52e4
  • 1.52e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.51
  • 48.51
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
  • 1.87e4
  • 1.94e4
  • 2.30e4
46.81
  • 46.81
  • 37.33
  • 34.94
  • 22.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.00
  • 41.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.13
  • 33.13
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.00e4
  • 2.00e4
32.98
  • 32.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.34
  • 30.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.01
  • 26.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000059361 (slc39a4)
ZFINZDB-GENE-060315-8 (slc39a4)
EMBLBC163862, CABZ01078991
Uniprot/SPTREMBLB3DKI6, B3DKI6_DANRE

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