D. rerio Gene: prune2 - ENSDARG00000059423 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059423
Nameprune2
Descriptionprune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7152528, kiaa0367, si:dkey-267i17.5, wu:fd19g03
Orthologs(s)3 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.26e3
  • 2.26e3
92.44
  • 92.44
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.69e3
  • 2.69e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
  • 7.00e3
87.46
  • 87.46
  • 76.57
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.37
  • 83.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
5.13e3
  • 5.13e3
  • 8.20e3
  • 1.13e4
  • 1.39e4
  • 1.43e4
82.82
  • 82.82
  • 72.53
  • 62.30
  • 53.45
  • 52.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.59e3
  • 7.59e3
  • 1.05e4
74.58
  • 74.58
  • 64.72
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.37
  • 74.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.50e4
  • 1.50e4
61.70
  • 61.70
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.57
  • 61.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.50e4
55.43
  • 55.43
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.53e4
  • 1.53e4
48.76
  • 48.76
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.54
  • 48.54
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.68
  • 47.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.85
  • 39.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.60
  • 37.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.48
  • 28.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000059423.

Cross-references

EnsemblENSDARG00000059423 (prune2)
ZFINZDB-GENE-050309-222 (prune2)
EMBLBX571945
Uniprot/SPTREMBLA2BHH5, A2BHH5_DANRE, F1QHC1, F1QHC1_DANRE

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