Gene: wasf3a - ENSDARG00000059466 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000059466
Name	wasf3a
Description	WAS protein family, member 3a [Source:ZFIN;Acc:ZDB-GENE-060531-55]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-271b14.7
Orthologs(s)	5 orthologs
Paralog(s)	9 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000966	retina	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	876 876 8.86e3	97.07 97.07 70.33	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.02e4 1.02e4	65.89 65.89	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	1.09e4 1.09e4 1.52e4 2.23e4	63.61 63.61 49.03 25.46	AEIR AEIR AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.41e4 1.41e4	52.94 52.94	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.45e4 1.45e4	51.36 51.36	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.55e4 1.55e4	48.23 48.23	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.59e4 1.59e4 1.98e4	46.78 46.78 33.60	AEIR AEIR AEIR
UBERON:0002199	integument	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.77 40.77	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.78e4 1.78e4	40.55 40.55	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.80e4 1.80e4	39.74 39.74	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	2.05e4 2.05e4	31.31 31.31	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.09e4 2.09e4	29.99 29.99	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.11e4 2.11e4	29.25 29.25	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.45e4 2.45e4	17.96 17.96	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	5 species Drosophila melanogaster (fruit fly) Drosophila ananassae Drosophila mojavensis Drosophila virilis Drosophila yakuba	5 genes FBgn0041781 SCAR FBgn0092862 GF15838 FBgn0143321 GI20586 FBgn0201145 GJ13927 FBgn0235914 GE18500	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000059466.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	3 genes ENSDARG00000023940 si:ch73-362m14.4 ENSDARG00000062948 wasf3b ENSDARG00000069600 zgc:109889	Compare expression	[+]
Deuterostomia	4 genes ENSDARG00000023940 si:ch73-362m14.4 ENSDARG00000024209 wasf2 ENSDARG00000062948 wasf3b ENSDARG00000069600 zgc:109889	Compare expression	[+]
Opisthokonta	9 genes ENSDARG00000009525 tial1 ENSDARG00000018574 sf3b4 ENSDARG00000023940 si:ch73-362m14.4 ENSDARG00000024209 wasf2 ENSDARG00000026476 tia1l ENSDARG00000052536 tia1 ENSDARG00000062948 wasf3b ENSDARG00000069600 zgc:109889 ENSDARG00000103823 RBMS1 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000059466.

Cross-references

Ensembl	ENSDARG00000059466 (wasf3a)
ZFIN	ZDB-GENE-060531-55 (wasf3a)
EMBL	BX247876
Uniprot/SPTREMBL	A2BEV5, A2BEV5_DANRE, E9QF08, E9QF08_DANRE