D. rerio Gene: tead1b - ENSDARG00000059483 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059483
Nametead1b
DescriptionTEA domain family member 1b [Source:ZFIN;Acc:ZDB-GENE-091013-5]
OrganismDanio rerio (zebrafish)
Synonym(s)tead1
Orthologs(s)18 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
760
  • 760
  • 2.08e3
  • 2.73e3
  • 1.11e4
97.46
  • 97.46
  • 93.04
  • 90.85
  • 62.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
891
  • 891
  • 4.04e3
  • 4.21e3
  • 4.83e3
  • 4.83e3
  • 8.73e3
  • 9.19e3
  • 9.39e3
  • 9.46e3
  • 9.57e3
97.02
  • 97.02
  • 86.46
  • 85.92
  • 83.84
  • 83.84
  • 70.77
  • 69.24
  • 68.57
  • 68.31
  • 67.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.50e3
  • 1.50e3
94.98
  • 94.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
  • 6.99e3
94.44
  • 94.44
  • 76.60
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.35e3
  • 2.35e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
3.06e3
  • 3.06e3
  • 3.33e3
  • 3.70e3
  • 3.88e3
  • 3.91e3
  • 3.92e3
  • 4.35e3
  • 4.78e3
  • 5.07e3
  • 5.25e3
  • 5.45e3
  • 6.44e3
  • 1.20e4
89.75
  • 89.75
  • 88.85
  • 87.60
  • 87.00
  • 86.92
  • 86.86
  • 85.42
  • 84.00
  • 83.02
  • 82.41
  • 81.75
  • 78.45
  • 59.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
5.03e3
  • 5.03e3
  • 6.50e3
  • 8.21e3
  • 9.49e3
  • 1.33e4
83.16
  • 83.16
  • 78.25
  • 72.50
  • 68.21
  • 55.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
  • 8.74e3
82.77
  • 82.77
  • 70.74
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.24e3
  • 5.24e3
  • 7.51e3
  • 1.12e4
82.47
  • 82.47
  • 74.86
  • 62.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.60e3
  • 5.60e3
81.25
  • 81.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.70e3
  • 7.70e3
  • 8.65e3
74.20
  • 74.20
  • 71.04
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.74e3
  • 7.74e3
74.10
  • 74.10
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.97
  • 69.97
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.05
  • 68.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.88e3
  • 9.88e3
66.93
  • 66.93
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.39
  • 66.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.29
  • 66.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
  • 1.20e4
63.17
  • 63.17
  • 59.72
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.47
  • 58.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.85
  • 54.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.29
  • 50.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.23
  • 48.23
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.62e4
  • 1.62e4
45.89
  • 45.89
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.66e4
  • 1.66e4
44.35
  • 44.35
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.38
  • 40.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSDARG00000059483.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Metazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059483.

Cross-references

EnsemblENSDARG00000059483 (tead1b)
ZFINZDB-GENE-091013-5 (tead1b)
EMBLCT573494
Uniprot/SPTREMBLF1QKA3, F1QKA3_DANRE, F8W5M8, F8W5M8_DANRE

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