D. rerio Gene: JPH3 (1 to many) - ENSDARG00000059534 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059534
NameJPH3 (1 to many)
Descriptionsi:ch211-146m13.3 [Source:ZFIN;Acc:ZDB-GENE-110408-64]
OrganismDanio rerio (zebrafish)
Synonym(s)cagl237, hdl2, jp-3, jp3, tnrc22

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.51
  • 90.51
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
  • 1.18e4
81.58
  • 81.58
  • 60.59
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.44e3
  • 7.44e3
  • 8.17e3
  • 1.29e4
  • 1.52e4
  • 1.60e4
75.10
  • 75.10
  • 72.64
  • 56.96
  • 48.98
  • 46.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.71e3
  • 8.71e3
70.83
  • 70.83
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.03e4
  • 1.03e4
  • 1.23e4
65.58
  • 65.58
  • 58.66
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
56.91
  • 56.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.34e4
  • 1.34e4
55.29
  • 55.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.31
  • 53.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.38
  • 36.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000059534 (JPH3 (1 to many))
HGNCHGNC:14203 (JPH3 (1 to many))
ZFINZDB-GENE-110408-64 (si:ch211-146m13.3)
EMBLAL929115
Uniprot/SPTREMBLE7F2R3, E7F2R3_DANRE

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