D. rerio Gene: xylt2 - ENSDARG00000059557 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059557
Namexylt2
Descriptionxylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:194562
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.10e4
  • 1.10e4
  • 1.39e4
63.06
  • 63.06
  • 53.36
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
60.10
  • 60.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.57
  • 59.57
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.16
  • 59.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.40e4
  • 1.40e4
  • 1.54e4
53.06
  • 53.06
  • 48.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.55e4
52.83
  • 52.83
  • 48.09
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.86
  • 50.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.37
  • 48.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.69
  • 46.69
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.60e4
  • 1.60e4
  • 1.62e4
  • 1.62e4
  • 1.72e4
  • 2.05e4
46.53
  • 46.53
  • 45.72
  • 45.69
  • 42.27
  • 31.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.20
  • 45.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.98
  • 44.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.66
  • 44.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.52
  • 44.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.60
  • 42.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.78
  • 39.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.01
  • 39.01
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.84e4
  • 1.84e4
  • 1.96e4
38.47
  • 38.47
  • 34.41
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.84e4
  • 1.84e4
  • 2.18e4
38.33
  • 38.33
  • 26.96
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.94
  • 35.94
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.40
  • 35.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.62
  • 34.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000059557.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000059557.

Cross-references

EnsemblENSDARG00000059557 (xylt2)
ZFINZDB-GENE-081022-125 (xylt2)
Uniprot/SPTREMBLE7F216, E7F216_DANRE

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