D. rerio Gene: fscn2a - ENSDARG00000059574 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059574
Namefscn2a
Descriptionfascin actin-bundling protein 2a, retinal [Source:ZFIN;Acc:ZDB-GENE-110901-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)22 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000036Larval:Day 4
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.41e4
57.16
  • 57.16
  • 52.74
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.33e4
  • 1.33e4
  • 2.39e4
55.43
  • 55.43
  • 20.09
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
  • 2.00e4
  • 2.15e4
  • 2.41e4
47.42
  • 47.42
  • 33.07
  • 28.13
  • 19.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.62e4
  • 1.62e4
  • 1.66e4
45.75
  • 45.75
  • 44.47
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.33
  • 44.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.05
  • 41.05
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.46
  • 26.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.92
  • 24.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.98
  • 23.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000059574.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Vertebrata2 genesCompare expression
Deuterostomia3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059574.

Cross-references

EnsemblENSDARG00000059574 (fscn2a)
ZFINZDB-GENE-110901-1 (fscn2a)
Uniprot/SPTREMBLF1QK37, F1QK37_DANRE

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