D. rerio Gene: clip2 - ENSDARG00000059596 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059596
Nameclip2
DescriptionCAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
OrganismDanio rerio (zebrafish)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
3.41e3
  • 3.41e3
  • 3.83e3
  • 6.96e3
  • 7.63e3
  • 8.44e3
  • 8.89e3
  • 9.62e3
  • 9.72e3
  • 1.01e4
  • 1.12e4
88.58
  • 88.58
  • 87.17
  • 76.70
  • 74.44
  • 71.73
  • 70.23
  • 67.79
  • 67.45
  • 66.06
  • 62.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.94e3
  • 4.94e3
  • 6.25e3
  • 9.98e3
  • 1.07e4
  • 1.08e4
83.46
  • 83.46
  • 79.07
  • 66.58
  • 64.05
  • 63.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.15e3
  • 6.15e3
79.39
  • 79.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
6.24e3
  • 6.24e3
  • 6.34e3
  • 9.63e3
  • 1.03e4
  • 1.05e4
  • 1.06e4
79.11
  • 79.11
  • 78.79
  • 67.75
  • 65.67
  • 64.90
  • 64.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
  • 7.84e3
  • 8.27e3
  • 1.07e4
78.49
  • 78.49
  • 73.76
  • 72.32
  • 64.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.79e3
  • 7.79e3
73.93
  • 73.93
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
  • 9.45e3
73.52
  • 73.52
  • 68.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.05e3
  • 8.05e3
  • 8.42e3
73.04
  • 73.04
  • 71.82
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.23e3
  • 8.23e3
72.44
  • 72.44
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.32e3
  • 9.32e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
9.67e3
  • 9.67e3
  • 9.84e3
  • 9.91e3
  • 1.01e4
  • 1.01e4
  • 1.02e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
  • 1.06e4
  • 1.07e4
  • 1.08e4
  • 1.11e4
  • 1.12e4
67.62
  • 67.62
  • 67.05
  • 66.82
  • 66.20
  • 66.02
  • 65.92
  • 64.90
  • 64.79
  • 64.70
  • 64.59
  • 64.19
  • 63.99
  • 62.95
  • 62.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.01e4
  • 1.01e4
66.26
  • 66.26
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.20e4
65.31
  • 65.31
  • 59.83
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.08
  • 65.08
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.30
  • 64.30
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.70e4
64.14
  • 64.14
  • 42.91
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e4
  • 1.12e4
62.47
  • 62.47
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.08
  • 62.08
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.23e4
  • 1.34e4
59.82
  • 59.82
  • 58.91
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.86
  • 57.86
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.58
  • 53.58
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.41
  • 49.41
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.59
  • 48.59
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.15
  • 48.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.62
  • 45.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.57
  • 44.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.32
  • 43.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.13
  • 42.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.62
  • 40.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000059596 (clip2)
ZFINZDB-GENE-100727-3 (clip2)
EMBLBX901917
Uniprot/SPTREMBLF1QIN6, F1QIN6_DANRE, F8W339, F8W339_DANRE, F8W496, F8W496_DANRE, F8W4J2, F8W4J2_DANRE

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