D. rerio Gene: asphd2 - ENSDARG00000059629 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059629
Nameasphd2
Descriptionaspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153516
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.90e3
  • 1.90e3
  • 6.59e3
  • 1.41e4
93.65
  • 93.65
  • 77.94
  • 52.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
  • 5.84e3
90.45
  • 90.45
  • 80.43
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.00e3
  • 5.00e3
  • 6.06e3
  • 6.96e3
  • 1.09e4
83.25
  • 83.25
  • 79.70
  • 76.68
  • 63.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
5.34e3
  • 5.34e3
  • 5.64e3
  • 6.03e3
  • 6.33e3
  • 7.16e3
  • 8.01e3
  • 8.37e3
  • 8.57e3
  • 8.60e3
  • 9.88e3
82.12
  • 82.12
  • 81.11
  • 79.82
  • 78.80
  • 76.04
  • 73.18
  • 71.97
  • 71.31
  • 71.21
  • 66.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.95e3
  • 5.95e3
  • 6.16e3
80.08
  • 80.08
  • 79.38
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.89
  • 79.89
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
  • 7.23e3
  • 7.77e3
  • 7.79e3
  • 8.10e3
  • 8.11e3
  • 8.27e3
  • 8.37e3
  • 9.33e3
  • 9.49e3
  • 9.63e3
  • 9.75e3
  • 1.04e4
  • 1.13e4
  • 1.50e4
77.72
  • 77.72
  • 75.79
  • 73.97
  • 73.92
  • 72.87
  • 72.83
  • 72.32
  • 71.96
  • 68.77
  • 68.21
  • 67.77
  • 67.34
  • 65.05
  • 62.14
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.68e3
  • 6.68e3
  • 7.07e3
  • 7.37e3
77.64
  • 77.64
  • 76.32
  • 75.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.49e3
  • 7.49e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.65e3
  • 7.65e3
74.40
  • 74.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.74
  • 73.74
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.56
  • 72.56
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
  • 1.30e4
72.12
  • 72.12
  • 56.34
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
8.67e3
  • 8.67e3
  • 9.80e3
  • 1.03e4
  • 1.10e4
  • 1.12e4
  • 1.13e4
70.96
  • 70.96
  • 67.18
  • 65.39
  • 63.15
  • 62.50
  • 62.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
69.25
  • 69.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.66
  • 67.66
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.74e3
  • 9.74e3
67.37
  • 67.37
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.83e3
  • 9.83e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
1.07e4
  • 1.07e4
  • 1.16e4
  • 1.16e4
  • 1.17e4
  • 1.39e4
64.29
  • 64.29
  • 61.27
  • 61.07
  • 60.94
  • 53.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.44
  • 62.44
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.15e4
  • 1.15e4
61.51
  • 61.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.91
  • 60.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.71
  • 46.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000059629 (asphd2)
ZFINZDB-GENE-061103-142 (asphd2)
EMBLBC125876, CR388077
Uniprot/SPTREMBLB0UXV2, B0UXV2_DANRE, B0UXV3, B0UXV3_DANRE
Uniprot/SWISSPROTA0JMH0, ASPH2_DANRE

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