D. rerio Gene: nol6 - ENSDARG00000059711 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059711
Namenol6
Descriptionnucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fi43b02
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
1.73e3
  • 1.73e3
  • 2.79e3
  • 2.88e3
  • 3.08e3
  • 3.15e3
  • 4.12e3
94.21
  • 94.21
  • 90.67
  • 90.36
  • 89.68
  • 89.46
  • 86.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.93e3
  • 1.93e3
93.53
  • 93.53
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.16e3
  • 2.16e3
92.77
  • 92.77
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
2.56e3
  • 2.56e3
  • 2.59e3
  • 3.24e3
  • 3.67e3
  • 3.81e3
  • 4.98e3
  • 6.36e3
  • 9.30e3
  • 1.15e4
  • 1.19e4
91.44
  • 91.44
  • 91.34
  • 89.14
  • 87.70
  • 87.26
  • 83.34
  • 78.71
  • 68.88
  • 61.44
  • 60.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.43
  • 91.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.93e3
  • 2.93e3
  • 2.95e3
  • 3.00e3
  • 3.35e3
  • 3.36e3
  • 5.05e3
  • 6.16e3
  • 6.73e3
  • 8.37e3
  • 9.15e3
  • 9.35e3
  • 1.03e4
  • 1.06e4
  • 1.30e4
  • 1.41e4
  • 1.47e4
  • 1.49e4
90.19
  • 90.19
  • 90.12
  • 89.97
  • 88.79
  • 88.77
  • 83.08
  • 79.37
  • 77.47
  • 71.96
  • 69.36
  • 68.69
  • 65.47
  • 64.43
  • 56.62
  • 52.87
  • 50.90
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
3.34e3
  • 3.34e3
  • 3.79e3
  • 4.04e3
  • 5.62e3
  • 5.75e3
88.84
  • 88.84
  • 87.30
  • 86.47
  • 81.18
  • 80.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.29
  • 88.29
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.67e3
  • 3.67e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.51
  • 86.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.22
  • 85.22
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.80e3
  • 4.80e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
  • 1.11e4
81.33
  • 81.33
  • 62.93
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.95e3
  • 5.95e3
80.09
  • 80.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
  • 8.07e3
  • 9.90e3
  • 1.36e4
79.66
  • 79.66
  • 72.96
  • 66.85
  • 54.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.41e3
  • 6.41e3
78.55
  • 78.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.16
  • 78.16
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.04
  • 76.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.34e3
  • 7.34e3
  • 1.27e4
75.44
  • 75.44
  • 57.57
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
  • 1.50e4
72.77
  • 72.77
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.69
  • 72.69
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.35e3
  • 8.35e3
  • 8.62e3
72.05
  • 72.05
  • 71.12
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.91e3
  • 8.91e3
  • 9.82e3
  • 1.09e4
70.18
  • 70.18
  • 67.13
  • 63.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
67.30
  • 67.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.90
  • 65.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.69
  • 65.69
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.20e4
63.78
  • 63.78
  • 59.86
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.77
  • 62.77
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.32
  • 60.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000059711.

Cross-references

EnsemblENSDARG00000059711 (nol6)
ZFINZDB-GENE-030131-6294 (nol6)
EMBLBX000437
Uniprot/SPTREMBLE7F5S6, E7F5S6_DANRE, F1Q4S6, F1Q4S6_DANRE

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