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D. rerio Gene: SRCIN1 (1 to many) - ENSDARG00000059773 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059773
NameSRCIN1 (1 to many)
Descriptionsi:ch211-278a6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-699]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa1684, p140cap, snip
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.06e3
  • 5.06e3
83.06
  • 83.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.15e4
  • 1.15e4
  • 1.21e4
  • 1.84e4
  • 2.06e4
  • 2.09e4
61.47
  • 61.47
  • 59.39
  • 38.30
  • 31.09
  • 29.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.37e4
57.80
  • 57.80
  • 54.08
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.10
  • 57.10
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.10
  • 54.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.76e4
  • 1.76e4
  • 1.96e4
41.07
  • 41.07
  • 34.36
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.34
  • 40.34
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.86
  • 33.86
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.97
  • 31.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000059773 (SRCIN1 (1 to many))
HGNCHGNC:29506 (SRCIN1 (1 to many))
ZFINZDB-GENE-060503-699 (si:ch211-278a6.1)
EMBLBX640580, BX649288, BX649535
Uniprot/SPTREMBLE7F1Y0, E7F1Y0_DANRE, F1QL76, F1QL76_DANRE

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