D. rerio Gene: clk2b - ENSDARG00000059870 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059870
Nameclk2b
DescriptionCDC-like kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-1126]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153684
Orthologs(s)16 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.39e3
  • 1.39e3
  • 1.96e3
  • 3.35e3
  • 4.37e3
  • 4.86e3
95.35
  • 95.35
  • 93.45
  • 88.79
  • 85.37
  • 83.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.15e3
  • 2.15e3
  • 1.50e4
92.80
  • 92.80
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.48e3
  • 3.48e3
88.34
  • 88.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.26e3
  • 4.26e3
85.74
  • 85.74
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
  • 4.84e3
  • 5.56e3
  • 5.63e3
  • 6.04e3
  • 7.01e3
  • 7.15e3
  • 9.16e3
  • 9.71e3
  • 9.87e3
  • 9.91e3
  • 1.12e4
  • 1.20e4
  • 1.22e4
  • 1.35e4
  • 1.50e4
85.45
  • 85.45
  • 83.81
  • 81.38
  • 81.14
  • 79.78
  • 76.54
  • 76.07
  • 69.32
  • 67.47
  • 66.95
  • 66.83
  • 62.40
  • 59.77
  • 59.18
  • 54.83
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.35e3
  • 4.35e3
  • 4.57e3
  • 4.57e3
  • 5.44e3
  • 6.54e3
  • 6.88e3
85.45
  • 85.45
  • 84.70
  • 84.69
  • 81.79
  • 78.10
  • 76.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.64e3
  • 4.64e3
84.47
  • 84.47
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.74e3
  • 4.74e3
84.11
  • 84.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.88e3
  • 4.88e3
83.67
  • 83.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.90e3
  • 4.90e3
83.60
  • 83.60
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.00e3
  • 5.00e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.17
  • 83.17
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.41e3
  • 5.41e3
  • 6.03e3
  • 7.04e3
  • 1.20e4
81.89
  • 81.89
  • 79.81
  • 76.43
  • 59.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
79.73
  • 79.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
6.39e3
  • 6.39e3
  • 6.49e3
  • 7.55e3
  • 7.63e3
  • 8.53e3
  • 8.80e3
  • 8.92e3
  • 9.24e3
  • 9.28e3
  • 1.07e4
78.61
  • 78.61
  • 78.28
  • 74.70
  • 74.45
  • 71.46
  • 70.55
  • 70.12
  • 69.06
  • 68.94
  • 64.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
  • 1.20e4
77.25
  • 77.25
  • 59.83
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.36e3
  • 7.36e3
  • 1.77e4
75.37
  • 75.37
  • 40.85
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
  • 1.08e4
72.75
  • 72.75
  • 63.84
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.54e3
  • 9.54e3
  • 9.96e3
  • 1.15e4
68.07
  • 68.07
  • 66.65
  • 61.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.98e3
  • 9.98e3
  • 1.05e4
66.59
  • 66.59
  • 64.78
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.38
  • 65.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.25
  • 64.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.89
  • 61.89
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.29
  • 56.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Eumetazoa3 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059870.

Cross-references

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