Gene: fam222ba - ENSDARG00000059886 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000059886
Name	fam222ba
Description	family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-9e15.1
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.88e3 1.88e3	93.72 93.72	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	3.43e3 3.43e3	88.53 88.53	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	3.47e3 3.47e3	88.37 88.37	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	4.07e3 4.07e3	86.39 86.39	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	4.50e3 4.50e3 5.77e3	84.93 84.93 80.69	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage ZFS:0000037Larval:Day 5 UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5	4.85e3 4.85e3 5.82e3 6.08e3 7.03e3 8.00e3	83.76 83.76 80.52 79.63 76.47 73.23	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	5.92e3 5.92e3 8.74e3	80.16 80.16 70.73	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	6.25e3 6.25e3	79.07 79.07	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	6.71e3 6.71e3 9.77e3	77.54 77.54 67.28	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.88e3 6.88e3	76.97 76.97	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	7.53e3 7.53e3 1.05e4	74.78 74.78 64.80	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	7.79e3 7.79e3	73.92 73.92	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.85e3 7.85e3	73.70 73.70	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.92e3 7.92e3 9.50e3	73.49 73.49 68.20	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.96e3 7.96e3	73.35 73.35	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	8.24e3 8.24e3	72.41 72.41	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	8.77e3 8.77e3	70.62 70.62	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.02e4 1.02e4	65.94 65.94	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.11e4 1.11e4	62.77 62.77	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.18e4 1.18e4	60.64 60.64	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.23e4 1.23e4	58.67 58.67	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.29e4 1.29e4	56.75 56.75	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.76 50.76	AEIR AEIR
UBERON:0000080	mesonephros	[+] 1 stage UBERON:0000066fully formed stage	1.48e4 1.48e4	50.57 50.57	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.69 40.69	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.13e4 2.13e4	28.62 28.62	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Neopterygii	1 gene ENSDARG00000078578 fam222bb	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000059886.

Cross-references

Ensembl	ENSDARG00000059886 (fam222ba)
ZFIN	ZDB-GENE-060526-355 (fam222ba)
EMBL	BX571977
Uniprot/SPTREMBL	B0S710, B0S710_DANRE