D. rerio Gene: sv2c - ENSDARG00000059997 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059997
Namesv2c
Descriptionsynaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-18p14.1
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.11e3
  • 6.11e3
79.55
  • 79.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.44
  • 67.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.10
  • 48.10
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.56e4
  • 1.56e4
  • 2.09e4
47.77
  • 47.77
  • 30.09
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
  • 1.70e4
  • 1.94e4
  • 1.97e4
  • 1.99e4
44.58
  • 44.58
  • 43.17
  • 34.92
  • 33.94
  • 33.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.69e4
  • 1.69e4
43.45
  • 43.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.79
  • 33.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.34
  • 33.34
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.05e4
  • 2.05e4
  • 2.07e4
31.44
  • 31.44
  • 30.54
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.62
  • 29.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059997.

Cross-references

EnsemblENSDARG00000059997 (sv2c)
ZFINZDB-GENE-060526-233 (sv2c)
EMBLBX294131, CR854913
Uniprot/SPTREMBLA2CF25, A2CF25_DANRE

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