D. rerio Gene: ogg1 - ENSDARG00000060002 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060002
Nameogg1
Description8-oxoguanine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070112-932]
OrganismDanio rerio (zebrafish)
Synonym(s)e7fgf4, zgc:158858
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002081cardiac atrium
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.58
  • 70.58
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
  • 1.30e4
69.99
  • 69.99
  • 56.38
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.39e3
  • 9.39e3
  • 9.65e3
68.58
  • 68.58
  • 67.68
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000034Hatching:Pec-fin
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000034Hatching:Pec-fin
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.96e3
  • 9.96e3
  • 1.09e4
  • 1.26e4
66.67
  • 66.67
  • 63.53
  • 57.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.47
  • 65.47
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.48
  • 63.48
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
  • 1.23e4
  • 1.40e4
  • 1.53e4
  • 1.61e4
62.61
  • 62.61
  • 58.76
  • 53.23
  • 48.74
  • 46.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.50e4
61.83
  • 61.83
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.20e4
61.75
  • 61.75
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.93
  • 60.93
AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
  • 1.41e4
59.99
  • 59.99
  • 52.75
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.22e4
  • 1.22e4
59.15
  • 59.15
AEIR
  • AEIR
UBERON:0009881anterior lateral plate mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000031Pharyngula:Prim-25
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
56.79
  • 56.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.64
  • 56.64
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.59
  • 56.59
AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000033Hatching:Long-pec
1.32e4
  • 1.32e4
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000026Segmentation:14-19 somites
1.34e4
  • 1.34e4
  • 1.42e4
  • 1.49e4
  • 1.49e4
54.99
  • 54.99
  • 52.61
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000029Pharyngula:Prim-5
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.36e4
  • 1.36e4
  • 1.68e4
54.45
  • 54.45
  • 43.88
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000033Hatching:Long-pec
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.13
  • 53.13
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.46e4
  • 1.46e4
51.11
  • 51.11
AEIR
  • AEIR
UBERON:0005725olfactory system
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2007014anterior presumptive neural plate
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.97
  • 49.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.04
  • 49.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.91
  • 48.91
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.43
  • 48.43
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
  • 1.61e4
47.35
  • 47.35
  • 46.21
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.20
  • 47.20
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.63e4
  • 1.63e4
  • 1.64e4
45.57
  • 45.57
  • 44.97
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.28
  • 42.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060002.

Cross-references

Do not show this banner again