D. rerio Gene: nedd4l - ENSDARG00000060006 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060006
Namenedd4l
Descriptionneural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
OrganismDanio rerio (zebrafish)
Synonym(s)nedd4b
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.32
  • 91.32
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
  • 3.97e3
90.69
  • 90.69
  • 86.71
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
88.99
  • 88.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.40e3
  • 3.40e3
  • 3.58e3
  • 9.08e3
  • 1.03e4
  • 1.31e4
88.60
  • 88.60
  • 88.02
  • 69.61
  • 65.67
  • 56.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.47e3
  • 3.47e3
88.40
  • 88.40
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.31e3
  • 4.31e3
85.57
  • 85.57
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.49
  • 85.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.35
  • 85.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
4.83e3
  • 4.83e3
  • 1.36e4
  • 1.46e4
83.83
  • 83.83
  • 54.37
  • 50.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.58
  • 81.58
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.76e3
  • 5.76e3
  • 9.81e3
80.72
  • 80.72
  • 67.15
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.67
  • 79.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.11e3
  • 6.11e3
  • 1.33e4
79.55
  • 79.55
  • 55.40
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
6.33e3
  • 6.33e3
  • 7.67e3
  • 8.89e3
  • 9.34e3
  • 1.01e4
78.80
  • 78.80
  • 74.31
  • 70.25
  • 68.71
  • 66.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
76.56
  • 76.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
75.24
  • 75.24
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.83
  • 72.83
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.60e3
  • 8.60e3
  • 1.10e4
  • 1.23e4
71.22
  • 71.22
  • 63.01
  • 58.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000020Gastrula:75%-epiboly
9.13e3
  • 9.13e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
1.02e4
  • 1.02e4
  • 1.07e4
  • 1.15e4
  • 1.18e4
  • 1.19e4
  • 1.20e4
  • 1.20e4
  • 1.26e4
  • 1.28e4
  • 1.29e4
65.78
  • 65.78
  • 64.09
  • 61.53
  • 60.38
  • 60.15
  • 59.93
  • 59.76
  • 57.91
  • 57.28
  • 56.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
65.17
  • 65.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000060006.

Cross-references

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