D. rerio Gene: fam160b2 - ENSDARG00000060029 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060029
Namefam160b2
Descriptionfamily with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
OrganismDanio rerio (zebrafish)
Synonym(s)b0ux70, rai16, rai16l, zgc:153945
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.21e3
  • 5.21e3
  • 9.04e3
82.56
  • 82.56
  • 69.72
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.65
  • 81.65
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.71e3
  • 5.71e3
80.87
  • 80.87
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.86
  • 76.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.65e3
  • 7.65e3
  • 8.46e3
74.39
  • 74.39
  • 71.66
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.95e3
  • 7.95e3
73.38
  • 73.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.98
  • 72.98
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.91
  • 72.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.85e3
  • 8.85e3
70.37
  • 70.37
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.82
  • 69.82
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.19e3
  • 9.19e3
  • 1.23e4
69.22
  • 69.22
  • 58.66
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.98
  • 68.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.72e3
  • 9.72e3
  • 1.12e4
67.45
  • 67.45
  • 62.63
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.09e4
  • 1.11e4
  • 1.20e4
66.05
  • 66.05
  • 64.83
  • 63.48
  • 62.68
  • 59.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.60
  • 64.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
56.99
  • 56.99
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.36e4
55.90
  • 55.90
  • 54.36
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.50
  • 54.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000060029.

Cross-references

EnsemblENSDARG00000060029 (fam160b2)
ZFINZDB-GENE-061110-76 (fam160b2)
EMBLBC127400, CR354402
Uniprot/SWISSPROTA0JPF5, F16B2_DANRE

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