D. rerio Gene: slc47a2 - ENSDARG00000060051 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060051
Nameslc47a2
Descriptionsolute carrier family 47 (multidrug and toxin extrusion), member 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1472]
OrganismDanio rerio (zebrafish)
Synonym(s)mate1, mate3, slc47a1, zgc:158231
Orthologs(s)28 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
349
  • 349
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.64
  • 95.64
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.91
  • 94.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.31
  • 81.31
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
76.08
  • 76.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.41
  • 63.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.09
  • 61.09
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 1.83e4
58.83
  • 58.83
  • 38.87
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.03
  • 57.03
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.45
  • 56.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.73
  • 48.73
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.24
  • 47.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.66e4
  • 1.66e4
  • 2.09e4
  • 2.10e4
  • 2.31e4
44.30
  • 44.30
  • 29.98
  • 29.68
  • 22.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.68
  • 41.68
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.83e4
  • 1.83e4
  • 2.35e4
38.61
  • 38.61
  • 21.16
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Bilateria4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000060051.

Cross-references

EnsemblENSDARG00000060051 (slc47a2)
ZFINZDB-GENE-070112-1472 (slc47a2)
EMBLBC129166, BX248108, KF246564
Uniprot/SPTREMBLU3MYZ9, U3MYZ9_DANRE
Uniprot/SWISSPROTA1L1P9, S47A1_DANRE

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