D. rerio Gene: epc1b - ENSDARG00000060054 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060054
Nameepc1b
Descriptionenhancer of polycomb homolog 1 (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-090609-1]
OrganismDanio rerio (zebrafish)
Synonym(s)epc2, loc566102gn, zgc:158364
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.15e3
  • 3.15e3
89.47
  • 89.47
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
3.69e3
  • 3.69e3
  • 6.13e3
  • 1.55e4
87.65
  • 87.65
  • 79.47
  • 48.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.82e3
  • 3.82e3
  • 8.35e3
87.20
  • 87.20
  • 72.05
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.24
  • 86.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
  • 5.63e3
85.96
  • 85.96
  • 81.15
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
4.26e3
  • 4.26e3
  • 6.31e3
  • 1.18e4
  • 1.18e4
  • 1.50e4
85.75
  • 85.75
  • 78.88
  • 60.48
  • 60.43
  • 49.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
4.40e3
  • 4.40e3
  • 4.61e3
  • 6.54e3
  • 7.00e3
  • 7.75e3
  • 1.78e4
85.25
  • 85.25
  • 84.58
  • 78.11
  • 76.58
  • 74.04
  • 40.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.57e3
  • 4.57e3
84.69
  • 84.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.81
  • 83.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.80
  • 83.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.43
  • 81.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.87e3
  • 5.87e3
80.36
  • 80.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.54
  • 79.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.13
  • 74.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.62
  • 73.62
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.24
  • 73.24
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.90e3
  • 8.90e3
  • 1.39e4
  • 1.73e4
70.21
  • 70.21
  • 53.39
  • 41.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.28
  • 69.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.98
  • 60.98
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.30e4
  • 1.30e4
56.53
  • 56.53
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.30e4
  • 1.30e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
  • 1.52e4
  • 1.52e4
  • 1.53e4
  • 1.59e4
  • 1.62e4
  • 1.62e4
  • 1.65e4
  • 1.68e4
  • 1.70e4
  • 1.70e4
56.39
  • 56.39
  • 50.90
  • 50.20
  • 50.20
  • 49.06
  • 48.96
  • 48.65
  • 46.88
  • 45.80
  • 45.61
  • 44.62
  • 43.67
  • 43.24
  • 43.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000060054.

Cross-references

EnsemblENSDARG00000060054 (epc1b)
ZFINZDB-GENE-090609-1 (epc1b)
EMBLBC133736, CU693495
Uniprot/SPTREMBLA3KNA6, A3KNA6_DANRE

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