D. rerio Gene: PAPD5 - ENSDARG00000060071 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060071
NamePAPD5
DescriptionPAP associated domain containing 5 [Source:HGNC Symbol;Acc:HGNC:30758]
OrganismDanio rerio (zebrafish)
Synonym(s)trf4-2
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.10e3
  • 2.10e3
  • 3.33e3
92.96
  • 92.96
  • 88.87
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.79e3
  • 2.79e3
  • 5.05e3
90.68
  • 90.68
  • 83.08
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
  • 1.50e4
89.69
  • 89.69
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.82e3
  • 3.82e3
87.21
  • 87.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
  • 1.49e4
85.55
  • 85.55
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.34
  • 85.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
4.89e3
  • 4.89e3
  • 6.02e3
  • 6.21e3
  • 6.51e3
  • 6.54e3
83.64
  • 83.64
  • 79.83
  • 79.21
  • 78.22
  • 78.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.08e3
  • 5.08e3
  • 6.76e3
83.00
  • 83.00
  • 77.36
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.38e3
  • 5.38e3
  • 5.71e3
81.99
  • 81.99
  • 80.90
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.72
  • 80.72
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.06
  • 80.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.96
  • 79.96
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.13
  • 79.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.46
  • 78.46
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.53e3
  • 6.53e3
78.15
  • 78.15
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.30e3
  • 7.30e3
  • 7.59e3
75.55
  • 75.55
  • 74.58
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.45e3
  • 7.45e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.18e3
  • 8.18e3
72.63
  • 72.63
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.93
  • 68.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.86
  • 68.86
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.57
  • 52.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000060071 (PAPD5)
HGNCHGNC:30758 (PAPD5)
EMBLBC133101
Uniprot/SPTREMBLA2RUY9, A2RUY9_DANRE, F1RE44, F1RE44_DANRE

Do not show this banner again