D. rerio Gene: abi3a - ENSDARG00000060072 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060072
Nameabi3a
DescriptionABI family, member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-958]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153739
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.19
  • 78.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
76.21
  • 76.21
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.41e3
  • 7.41e3
  • 8.43e3
75.21
  • 75.21
  • 71.77
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
  • 1.28e4
  • 1.65e4
68.95
  • 68.95
  • 57.21
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.46e3
  • 9.46e3
68.32
  • 68.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.49e3
  • 9.49e3
  • 1.80e4
68.23
  • 68.23
  • 39.63
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.50
  • 67.50
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 1.44e4
  • 1.59e4
  • 1.71e4
  • 2.05e4
  • 2.05e4
66.66
  • 66.66
  • 51.95
  • 46.70
  • 42.58
  • 31.46
  • 31.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.52
  • 64.52
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.31
  • 64.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.08e4
  • 1.08e4
  • 1.82e4
63.68
  • 63.68
  • 39.06
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.34e4
  • 1.50e4
  • 1.50e4
  • 1.67e4
  • 1.69e4
  • 1.79e4
  • 1.81e4
57.08
  • 57.08
  • 55.01
  • 49.92
  • 49.81
  • 44.01
  • 43.26
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.41e4
  • 1.41e4
  • 1.46e4
  • 1.53e4
52.79
  • 52.79
  • 51.15
  • 48.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.43e4
  • 1.43e4
52.02
  • 52.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.20
  • 51.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.48
  • 47.48
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
42.07
  • 42.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.78e4
  • 1.78e4
40.49
  • 40.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000060072.

Cross-references

EnsemblENSDARG00000060072 (abi3a)
ZFINZDB-GENE-060929-958 (abi3a)
EMBLCR396582
Uniprot/SPTREMBLF1RE41, F1RE41_DANRE

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