D. rerio Gene: btaf1 - ENSDARG00000060089 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060089
Namebtaf1
DescriptionBTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
OrganismDanio rerio (zebrafish)
Synonym(s)tafii, wu:fd60h10, wu:fe26c12
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.73e3
  • 1.73e3
  • 5.16e3
  • 6.36e3
  • 6.64e3
  • 8.19e3
94.20
  • 94.20
  • 82.72
  • 78.72
  • 77.76
  • 72.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.68
  • 91.68
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
2.66e3
  • 2.66e3
  • 3.82e3
  • 5.48e3
  • 5.79e3
  • 6.09e3
  • 9.60e3
  • 1.00e4
  • 1.05e4
  • 1.05e4
  • 1.13e4
91.11
  • 91.11
  • 87.20
  • 81.64
  • 80.62
  • 79.60
  • 67.84
  • 66.46
  • 64.72
  • 64.68
  • 62.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.76e3
  • 2.76e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.38
  • 88.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.31
  • 87.31
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.08e3
  • 4.08e3
  • 6.33e3
  • 7.42e3
  • 7.53e3
86.34
  • 86.34
  • 78.80
  • 75.15
  • 74.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.65e3
  • 5.65e3
  • 6.14e3
81.07
  • 81.07
  • 79.44
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
5.70e3
  • 5.70e3
  • 7.04e3
  • 9.17e3
  • 9.48e3
  • 9.49e3
  • 9.99e3
80.92
  • 80.92
  • 76.42
  • 69.30
  • 68.25
  • 68.22
  • 66.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.72e3
  • 5.72e3
80.84
  • 80.84
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
  • 8.95e3
79.68
  • 79.68
  • 70.03
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.30
  • 79.30
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.46e3
  • 6.46e3
  • 1.20e4
78.36
  • 78.36
  • 59.68
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.57e3
  • 6.57e3
78.01
  • 78.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.06
  • 75.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.52
  • 73.52
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
7.97e3
  • 7.97e3
  • 9.51e3
  • 9.55e3
  • 9.60e3
  • 9.63e3
  • 9.64e3
  • 9.98e3
  • 9.99e3
  • 1.01e4
  • 1.02e4
  • 1.04e4
  • 1.06e4
  • 1.24e4
  • 1.25e4
73.31
  • 73.31
  • 68.17
  • 68.03
  • 67.87
  • 67.76
  • 67.73
  • 66.58
  • 66.54
  • 66.03
  • 65.78
  • 65.19
  • 64.38
  • 58.53
  • 58.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.25e3
  • 8.25e3
72.37
  • 72.37
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.38e3
  • 8.38e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.75e3
  • 8.75e3
70.70
  • 70.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.40
  • 70.40
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.27e3
  • 9.27e3
68.95
  • 68.95
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.49e3
  • 9.49e3
  • 9.93e3
  • 1.24e4
68.22
  • 68.22
  • 66.76
  • 58.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
  • 1.16e4
61.37
  • 61.37
  • 61.28
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.93
  • 54.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060089.

Cross-references

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