D. rerio Gene: aggf1 - ENSDARG00000060109 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060109
Nameaggf1
Descriptionangiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7146636, zgc:152959

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.21
  • 89.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.35e3
  • 3.35e3
  • 4.28e3
  • 6.63e3
  • 8.18e3
  • 8.93e3
88.80
  • 88.80
  • 85.66
  • 77.80
  • 72.61
  • 70.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.27e3
  • 4.27e3
  • 6.64e3
  • 7.67e3
  • 7.96e3
  • 8.19e3
  • 8.26e3
  • 8.30e3
  • 9.04e3
  • 9.49e3
  • 1.02e4
  • 1.12e4
  • 1.19e4
  • 1.24e4
  • 1.27e4
  • 1.28e4
  • 1.31e4
  • 1.38e4
  • 1.47e4
  • 1.49e4
85.71
  • 85.71
  • 77.77
  • 74.33
  • 73.35
  • 72.57
  • 72.36
  • 72.21
  • 69.73
  • 68.21
  • 66.00
  • 62.43
  • 60.09
  • 58.42
  • 57.34
  • 57.30
  • 56.12
  • 53.74
  • 50.90
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.61e3
  • 4.61e3
  • 5.29e3
  • 6.79e3
  • 7.90e3
  • 8.61e3
  • 8.71e3
84.57
  • 84.57
  • 82.28
  • 77.27
  • 73.54
  • 71.16
  • 70.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.08e3
  • 5.08e3
83.01
  • 83.01
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.84
  • 82.84
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
5.78e3
  • 5.78e3
  • 9.06e3
  • 1.04e4
  • 1.06e4
80.65
  • 80.65
  • 69.66
  • 65.06
  • 64.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.79e3
  • 5.79e3
80.61
  • 80.61
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.92e3
  • 5.92e3
80.17
  • 80.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.30e3
  • 6.30e3
78.90
  • 78.90
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.15e3
  • 7.15e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.17e3
  • 7.17e3
75.98
  • 75.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 7.47e3
  • 8.84e3
  • 1.47e4
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 70.39
  • 50.71
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001286caudal vein plexus
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.75
  • 74.75
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
8.00e3
  • 8.00e3
  • 9.30e3
  • 9.54e3
  • 9.87e3
  • 1.01e4
  • 1.06e4
  • 1.08e4
  • 1.27e4
  • 1.28e4
  • 1.30e4
73.20
  • 73.20
  • 68.87
  • 68.05
  • 66.95
  • 66.02
  • 64.35
  • 63.74
  • 57.45
  • 57.02
  • 56.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.45e3
  • 8.45e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
9.64e3
  • 9.64e3
  • 1.15e4
  • 1.22e4
  • 1.49e4
67.74
  • 67.74
  • 61.54
  • 59.08
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.63
  • 67.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.50
  • 67.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
  • 9.76e3
67.42
  • 67.42
  • 67.32
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.34
  • 67.34
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.80e3
  • 9.80e3
67.20
  • 67.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.06
  • 67.06
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.07e4
  • 1.07e4
  • 1.49e4
64.28
  • 64.28
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.22
  • 58.22
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.26e4
  • 1.26e4
  • 1.34e4
  • 1.52e4
57.87
  • 57.87
  • 55.18
  • 48.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000011Blastula:1k-cell
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCABZ01066456, CABZ01066457
EnsemblENSDARG00000060109 (aggf1)
Uniprot/SPTREMBLF1RD88, F1RD88_DANRE
ZFINZDB-GENE-060929-836 (aggf1)

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