D. rerio Gene: mrpl18 - ENSDARG00000060199 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060199
Namemrpl18
Descriptionmitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153420
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
  • 3.45e3
94.84
  • 94.84
  • 88.44
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.86e3
  • 1.86e3
93.79
  • 93.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.89e3
  • 1.89e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.94e3
  • 1.94e3
  • 2.46e3
  • 3.00e3
  • 3.13e3
  • 4.80e3
  • 4.95e3
  • 5.04e3
  • 5.16e3
  • 5.85e3
  • 6.53e3
93.50
  • 93.50
  • 91.75
  • 89.97
  • 89.54
  • 83.92
  • 83.44
  • 83.12
  • 82.74
  • 80.40
  • 78.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.71e3
  • 2.71e3
  • 4.33e3
  • 5.99e3
90.93
  • 90.93
  • 85.51
  • 79.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
2.77e3
  • 2.77e3
  • 4.42e3
  • 5.78e3
  • 6.07e3
  • 6.62e3
  • 7.20e3
90.74
  • 90.74
  • 85.21
  • 80.65
  • 79.68
  • 77.83
  • 75.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
  • 5.66e3
90.74
  • 90.74
  • 81.04
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.58
  • 89.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.12
  • 89.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.42e3
  • 3.42e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.84e3
  • 3.84e3
87.14
  • 87.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
86.59
  • 86.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.06e3
  • 4.06e3
  • 4.27e3
  • 5.19e3
  • 5.96e3
  • 8.10e3
86.40
  • 86.40
  • 85.69
  • 82.64
  • 80.06
  • 72.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
4.07e3
  • 4.07e3
  • 4.48e3
  • 4.87e3
  • 5.13e3
  • 5.14e3
  • 5.38e3
  • 5.51e3
  • 5.70e3
  • 5.74e3
  • 5.75e3
  • 5.93e3
  • 6.38e3
  • 7.24e3
  • 7.59e3
86.39
  • 86.39
  • 85.02
  • 83.71
  • 82.84
  • 82.80
  • 81.99
  • 81.57
  • 80.92
  • 80.77
  • 80.76
  • 80.16
  • 78.64
  • 75.77
  • 74.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.75
  • 84.75
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
  • 5.80e3
84.64
  • 84.64
  • 80.58
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.63e3
  • 4.63e3
  • 4.68e3
  • 5.47e3
  • 9.16e3
84.49
  • 84.49
  • 84.32
  • 81.68
  • 69.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.54e3
  • 5.54e3
81.45
  • 81.45
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.10e3
  • 6.10e3
79.57
  • 79.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.71e3
  • 6.71e3
  • 7.34e3
77.54
  • 77.54
  • 75.42
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.09
  • 37.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060199.

Cross-references

EnsemblENSDARG00000060199 (mrpl18)
ZFINZDB-GENE-061013-632 (mrpl18)
EMBLCR847496
Uniprot/SPTREMBLE9QDQ8, E9QDQ8_DANRE, F1R1S5, F1R1S5_DANRE

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