D. rerio Gene: prosc - ENSDARG00000060288 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060288
Nameprosc
Descriptionproline synthetase co-transcribed homolog (bacterial) [Source:ZFIN;Acc:ZDB-GENE-030131-1378]
OrganismDanio rerio (zebrafish)
Synonym(s)fb69e01, wu:fb69e01, wu:fc14a09
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.76e3
  • 1.76e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.97e3
  • 1.97e3
  • 8.14e3
93.42
  • 93.42
  • 72.76
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.27e3
  • 2.27e3
  • 3.36e3
92.41
  • 92.41
  • 88.74
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.22
  • 91.22
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
2.99e3
  • 2.99e3
  • 5.42e3
  • 5.50e3
  • 5.67e3
  • 6.02e3
  • 9.04e3
  • 1.06e4
  • 1.11e4
  • 1.11e4
  • 1.30e4
90.01
  • 90.01
  • 81.86
  • 81.60
  • 81.03
  • 79.86
  • 69.73
  • 64.57
  • 62.97
  • 62.93
  • 56.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.24
  • 88.24
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.74
  • 87.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.90e3
  • 3.90e3
  • 4.47e3
86.94
  • 86.94
  • 85.03
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.91
  • 86.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
86.38
  • 86.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
84.00
  • 84.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.89e3
  • 4.89e3
  • 5.52e3
  • 8.82e3
  • 9.97e3
  • 1.03e4
83.63
  • 83.63
  • 81.53
  • 70.47
  • 66.63
  • 65.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
4.98e3
  • 4.98e3
  • 6.84e3
  • 9.02e3
  • 1.06e4
  • 1.07e4
  • 1.20e4
83.33
  • 83.33
  • 77.11
  • 69.80
  • 64.42
  • 64.02
  • 59.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.32e3
  • 5.32e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.60e3
  • 5.60e3
  • 6.18e3
  • 1.00e4
81.24
  • 81.24
  • 79.32
  • 66.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
80.59
  • 80.59
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.01e3
  • 6.01e3
  • 6.10e3
  • 9.27e3
  • 9.47e3
79.88
  • 79.88
  • 79.56
  • 68.95
  • 68.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
6.44e3
  • 6.44e3
  • 6.49e3
  • 6.65e3
  • 7.57e3
  • 7.66e3
  • 9.74e3
  • 9.79e3
  • 9.81e3
  • 1.02e4
  • 1.02e4
  • 1.03e4
  • 1.05e4
  • 1.06e4
  • 1.06e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
78.45
  • 78.45
  • 78.28
  • 77.72
  • 74.66
  • 74.37
  • 67.37
  • 67.22
  • 67.16
  • 65.87
  • 65.81
  • 65.60
  • 64.82
  • 64.52
  • 64.40
  • 50.68
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.84e3
  • 6.84e3
77.11
  • 77.11
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.32e3
  • 7.32e3
75.51
  • 75.51
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.90e3
  • 7.90e3
73.56
  • 73.56
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.78e3
  • 8.78e3
  • 1.10e4
70.61
  • 70.61
  • 63.13
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.26
  • 63.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060288.

Cross-references

EnsemblENSDARG00000060288 (prosc)
ZFINZDB-GENE-030131-1378 (prosc)
EMBLBC160662, CT025912
Uniprot/SPTREMBLB1H1M3, B1H1M3_DANRE

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