D. rerio Gene: si:ch211-284e13.4 - ENSDARG00000060330 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060330
Namesi:ch211-284e13.4
Descriptionsi:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.54
  • 66.54
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.80e4
65.87
  • 65.87
  • 39.65
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
60.87
  • 60.87
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.33e4
  • 1.33e4
  • 1.42e4
  • 1.96e4
  • 2.09e4
  • 2.15e4
55.47
  • 55.47
  • 52.52
  • 34.37
  • 29.86
  • 27.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.44
  • 52.44
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.68e4
  • 1.68e4
  • 1.92e4
43.58
  • 43.58
  • 35.57
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.90
  • 24.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000060330 (si:ch211-284e13.4)
ZFINZDB-GENE-060526-161 (si:ch211-284e13.4)
EMBLBX294181
Uniprot/SPTREMBLA2BFQ2, A2BFQ2_DANRE, F1R0K8, F1R0K8_DANRE

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