D. rerio Gene: tbl1x - ENSDARG00000060438 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060438
Nametbl1x
Descriptiontransducin (beta)-like 1X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:158242
Orthologs(s)23 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.25
  • 87.25
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
4.03e3
  • 4.03e3
  • 8.18e3
86.50
  • 86.50
  • 72.60
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.55e3
  • 5.55e3
81.43
  • 81.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.60e3
  • 5.60e3
  • 6.39e3
81.24
  • 81.24
  • 78.62
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.85e3
  • 5.85e3
80.40
  • 80.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.61e3
  • 7.61e3
  • 8.58e3
  • 1.00e4
  • 1.01e4
  • 1.59e4
74.51
  • 74.51
  • 71.27
  • 66.48
  • 66.24
  • 46.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.56
  • 72.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.44
  • 69.44
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
65.26
  • 65.26
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.10
  • 64.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.40e4
59.88
  • 59.88
  • 53.26
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.54
  • 58.54
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.71e4
57.41
  • 57.41
  • 42.71
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 2.25e4
56.89
  • 56.89
  • 24.68
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.55
  • 56.55
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.39
  • 55.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.28
  • 54.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.02
  • 46.02
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.89
  • 44.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060438.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000060438.

Cross-references

EnsemblENSDARG00000060438 (tbl1x)
ZFINZDB-GENE-070209-131 (tbl1x)
EMBLBC133078, CU469547
Uniprot/SPTREMBLA2RUX0, A2RUX0_DANRE

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