D. rerio Gene: apba2b - ENSDARG00000060639 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060639
Nameapba2b
Descriptionamyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
OrganismDanio rerio (zebrafish)
Synonym(s)apba2, fd15a04, wu:fd15a04
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.00e3
  • 1.00e3
  • 8.89e3
96.65
  • 96.65
  • 70.22
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
1.22e3
  • 1.22e3
  • 2.79e3
  • 2.86e3
  • 3.38e3
  • 5.40e3
  • 6.50e3
  • 8.05e3
  • 1.23e4
  • 1.24e4
  • 1.27e4
  • 1.29e4
  • 1.34e4
  • 1.36e4
95.92
  • 95.92
  • 90.65
  • 90.42
  • 88.67
  • 81.93
  • 78.24
  • 73.04
  • 58.71
  • 58.59
  • 57.46
  • 56.79
  • 55.22
  • 54.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
  • 3.87e3
91.55
  • 91.55
  • 87.04
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.88e3
  • 2.88e3
  • 4.88e3
  • 5.91e3
90.36
  • 90.36
  • 83.67
  • 80.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
3.08e3
  • 3.08e3
  • 3.12e3
  • 5.91e3
  • 6.40e3
  • 7.45e3
  • 9.92e3
  • 1.10e4
  • 1.30e4
  • 1.39e4
89.68
  • 89.68
  • 89.57
  • 80.23
  • 78.57
  • 75.07
  • 66.78
  • 63.20
  • 56.40
  • 53.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.52e3
  • 5.52e3
  • 6.54e3
  • 8.29e3
  • 9.04e3
81.54
  • 81.54
  • 78.11
  • 72.23
  • 69.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.34e3
  • 8.34e3
72.08
  • 72.08
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.26e3
  • 9.26e3
69.01
  • 69.01
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.27
  • 59.27
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.26e4
  • 1.26e4
  • 1.39e4
  • 1.59e4
57.93
  • 57.93
  • 53.57
  • 46.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.74
  • 54.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.20
  • 47.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.74
  • 43.74
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
  • 1.84e4
41.53
  • 41.53
  • 38.50
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.86
  • 38.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.40
  • 38.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.38
  • 36.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.45
  • 35.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000060639 (apba2b)
ZFINZDB-GENE-030131-5371 (apba2b)
Uniprot/SPTREMBLF1Q9E4, F1Q9E4_DANRE

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