D. rerio Gene: pex11a - ENSDARG00000060707 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060707
Namepex11a
Descriptionperoxisomal biogenesis factor 11 alpha [Source:ZFIN;Acc:ZDB-GENE-050419-121]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-84g1.1, si:dkeyp-84g1.1 {eco:0000313|embl:aai51943.1,gn eco:0000313|zfin:zdb-gene-050419-121}
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.53e3
  • 5.53e3
  • 7.22e3
81.50
  • 81.50
  • 75.82
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.65e3
  • 6.65e3
77.74
  • 77.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
76.48
  • 76.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.85
  • 74.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.53e3
  • 7.53e3
74.79
  • 74.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.95
  • 69.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.03e4
  • 1.03e4
  • 1.46e4
65.50
  • 65.50
  • 51.05
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.22
  • 61.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.40
  • 60.40
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.18e4
  • 1.18e4
  • 1.49e4
60.36
  • 60.36
  • 50.19
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.22e4
  • 1.22e4
  • 1.39e4
  • 1.39e4
  • 1.49e4
  • 1.74e4
59.23
  • 59.23
  • 53.43
  • 53.41
  • 50.28
  • 41.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.30
  • 57.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.05
  • 54.05
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 1.51e4
52.17
  • 52.17
  • 49.54
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.66
  • 49.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.31
  • 45.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.58
  • 44.58
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
42.94
  • 42.94
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.81e4
  • 1.81e4
  • 1.84e4
39.25
  • 39.25
  • 38.49
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species19 genesCompare expression
Bilateria23 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000060707.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000060707.

Cross-references

EnsemblENSDARG00000060707 (pex11a)
ZFINZDB-GENE-050419-121 (pex11a)
EMBLBC151942, CR450716
Uniprot/SPTREMBLA3QJY9, A3QJY9_DANRE

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