D. rerio Gene: stim1a - ENSDARG00000060723 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060723
Namestim1a
Descriptionstromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-24p1.5
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.74
  • 92.74
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.62e3
  • 2.62e3
  • 2.67e3
  • 1.07e4
  • 1.07e4
  • 1.19e4
91.23
  • 91.23
  • 91.06
  • 64.28
  • 64.08
  • 60.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.05e3
  • 3.05e3
89.78
  • 89.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.84
  • 86.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.74
  • 86.74
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.05
  • 86.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.17e3
  • 4.17e3
  • 1.38e4
86.04
  • 86.04
  • 53.70
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.89
  • 84.89
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.86e3
  • 4.86e3
  • 7.03e3
83.73
  • 83.73
  • 76.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.52
  • 83.52
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.01e3
  • 5.01e3
83.22
  • 83.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.11
  • 82.11
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.01
  • 82.01
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
5.84e3
  • 5.84e3
  • 6.25e3
  • 1.24e4
  • 1.28e4
80.46
  • 80.46
  • 79.08
  • 58.32
  • 57.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.98
  • 79.98
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
6.53e3
  • 6.53e3
  • 6.71e3
  • 7.28e3
  • 8.70e3
  • 8.77e3
  • 1.26e4
  • 1.36e4
  • 1.37e4
  • 1.49e4
78.13
  • 78.13
  • 77.54
  • 75.63
  • 70.86
  • 70.63
  • 57.94
  • 54.44
  • 54.13
  • 50.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.11
  • 74.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.25e3
  • 8.25e3
72.38
  • 72.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.58e3
  • 8.58e3
  • 1.33e4
71.27
  • 71.27
  • 55.40
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.95e3
  • 9.95e3
  • 1.27e4
  • 1.63e4
66.70
  • 66.70
  • 57.56
  • 45.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.18e4
63.48
  • 63.48
  • 60.60
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.24e4
62.27
  • 62.27
  • 58.50
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.45e4
  • 1.47e4
  • 1.47e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.51e4
  • 1.52e4
  • 1.55e4
  • 1.59e4
  • 1.60e4
  • 1.61e4
  • 1.61e4
54.99
  • 54.99
  • 51.41
  • 50.88
  • 50.78
  • 50.74
  • 50.30
  • 50.18
  • 49.51
  • 49.12
  • 48.20
  • 46.65
  • 46.58
  • 46.14
  • 46.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000060723 (stim1a)
ZFINZDB-GENE-060503-914 (stim1a)
EMBLBX072550
Uniprot/SPTREMBLQ1LY88, Q1LY88_DANRE

Do not show this banner again