D. rerio Gene: cabp7b - ENSDARG00000060846 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060846
Namecabp7b
Descriptioncalcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
OrganismDanio rerio (zebrafish)
Synonym(s)cabp7a, si:dkeyp-15f12.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
4.12e3
  • 4.12e3
  • 1.79e4
  • 2.26e4
86.21
  • 86.21
  • 40.11
  • 24.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.19e3
  • 5.19e3
  • 2.08e4
82.62
  • 82.62
  • 30.49
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
5.25e3
  • 5.25e3
  • 1.36e4
82.41
  • 82.41
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
  • 9.70e3
81.35
  • 81.35
  • 67.52
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.81e3
  • 7.81e3
  • 1.50e4
73.84
  • 73.84
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
39.08
  • 39.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.70
  • 30.70
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.17e4
  • 2.17e4
27.20
  • 27.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000060846 (cabp7b)
ZFINZDB-GENE-060526-366 (cabp7b)
EMBLBX004981
Uniprot/SPTREMBLB0S519, B0S519_DANRE

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