D. rerio Gene: pstpip1a - ENSDARG00000060860 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060860
Namepstpip1a
Descriptionproline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-24l11.5
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.23
  • 93.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.29
  • 60.29
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.05
  • 57.05
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.54
  • 54.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.15
  • 53.15
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
  • 1.99e4
52.34
  • 52.34
  • 33.35
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.08
  • 52.08
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.88
  • 50.88
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.62
  • 49.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.52e4
  • 1.52e4
  • 1.91e4
49.20
  • 49.20
  • 35.94
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.05
  • 48.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.21
  • 46.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.33
  • 44.33
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
2.00e4
  • 2.00e4
  • 2.08e4
  • 2.11e4
  • 2.15e4
  • 2.17e4
33.05
  • 33.05
  • 30.47
  • 29.50
  • 28.02
  • 27.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.08e4
  • 2.08e4
  • 2.12e4
30.43
  • 30.43
  • 28.93
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000060860.

Cross-references

EnsemblENSDARG00000060860 (pstpip1a)
ZFINZDB-GENE-050419-251 (pstpip1a)
EMBLBX470164
Uniprot/SPTREMBLQ1LX61, Q1LX61_DANRE

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