D. rerio Gene: slc28a1 - ENSDARG00000060879 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060879
Nameslc28a1
Descriptionsolute carrier family 28 (concentrative nucleoside transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-117]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-24l11.1, zgc:158842
Orthologs(s)30 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.52
  • 88.52
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.56e3
  • 5.56e3
  • 2.43e4
81.37
  • 81.37
  • 18.71
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.35e4
  • 1.35e4
  • 1.92e4
  • 2.00e4
  • 2.16e4
54.69
  • 54.69
  • 35.59
  • 33.18
  • 27.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.38e4
  • 1.38e4
  • 1.68e4
53.92
  • 53.92
  • 43.71
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.55e4
  • 1.55e4
48.19
  • 48.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.14
  • 48.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.39
  • 43.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.84
  • 39.84
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.31
  • 39.31
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.12
  • 27.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.61
  • 20.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000060879 (slc28a1)
ZFINZDB-GENE-050419-117 (slc28a1)
EMBLBX470164
Uniprot/SPTREMBLF1QKB7, F1QKB7_DANRE, F1R1H1, F1R1H1_DANRE

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