D. rerio Gene: rnf217 - ENSDARG00000060944 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060944
Namernf217
Descriptionring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-208c9.4, zgc:174567

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.27e3
  • 6.27e3
  • 8.77e3
79.01
  • 79.01
  • 70.63
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.21e3
  • 7.21e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.79
  • 72.79
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.97e3
  • 8.97e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.07
  • 62.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.19e4
  • 1.19e4
  • 1.75e4
60.30
  • 60.30
  • 41.50
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.23
  • 57.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.22
  • 57.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.92
  • 54.92
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.55
  • 52.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.85
  • 50.85
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.50e4
  • 1.50e4
  • 1.97e4
49.68
  • 49.68
  • 34.08
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.55e4
  • 1.55e4
  • 1.77e4
48.17
  • 48.17
  • 40.73
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.77
  • 47.77
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.09
  • 46.09
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.60
  • 45.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.56
  • 45.56
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.38
  • 44.38
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.67e4
  • 1.67e4
  • 1.78e4
  • 1.84e4
  • 1.87e4
  • 1.89e4
43.93
  • 43.93
  • 40.56
  • 38.28
  • 37.37
  • 36.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.89
  • 42.89
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.13e4
  • 2.13e4
  • 2.28e4
28.71
  • 28.71
  • 23.53
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000060944 (rnf217)
ZFINZDB-GENE-060503-400 (rnf217)
EMBLBX936317
Uniprot/SPTREMBLF1QHB4, F1QHB4_DANRE, Q1LUI6, Q1LUI6_DANRE

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