D. rerio Gene: dync1i1 - ENSDARG00000060948 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000060948
Namedync1i1
Descriptiondynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
OrganismDanio rerio (zebrafish)
Synonym(s)sb:eu1013, zgc:158394
Orthologs(s)10 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.15
  • 90.15
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
  • 1.11e4
84.88
  • 84.88
  • 62.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
4.72e3
  • 4.72e3
  • 5.60e3
  • 8.46e3
  • 1.10e4
  • 1.17e4
84.19
  • 84.19
  • 81.26
  • 71.69
  • 63.17
  • 60.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.80e3
  • 5.80e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.86e3
  • 6.86e3
  • 7.94e3
77.04
  • 77.04
  • 73.42
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.55e3
  • 8.55e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.29e4
  • 1.47e4
60.70
  • 60.70
  • 59.08
  • 59.08
  • 58.32
  • 56.79
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.18
  • 58.18
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.79e4
52.66
  • 52.66
  • 40.01
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.42e4
  • 1.42e4
  • 1.51e4
52.37
  • 52.37
  • 49.40
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.51e4
  • 1.51e4
49.32
  • 49.32
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.75e4
  • 1.75e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.77
  • 36.77
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.06
  • 34.06
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.78
  • 30.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.82
  • 26.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000060948.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000060948.

Cross-references

EnsemblENSDARG00000060948 (dync1i1)
ZFINZDB-GENE-061215-62 (dync1i1)
EMBLBC128858, BX571853
Uniprot/SPTREMBLA1A5Y4, A1A5Y4_DANRE

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