D. rerio Gene: klhdc8a - ENSDARG00000061000 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061000
Nameklhdc8a
Descriptionkelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
OrganismDanio rerio (zebrafish)
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
65.60
  • 65.60
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.08e4
  • 1.08e4
  • 1.32e4
63.75
  • 63.75
  • 55.67
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.19
  • 54.19
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.47e4
  • 1.47e4
  • 1.62e4
  • 1.98e4
  • 2.26e4
50.65
  • 50.65
  • 45.66
  • 33.65
  • 24.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
  • 2.21e4
47.93
  • 47.93
  • 26.00
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.57e4
  • 1.57e4
47.49
  • 47.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.60e4
  • 1.60e4
46.44
  • 46.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.00
  • 35.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.07e4
  • 2.07e4
  • 2.08e4
30.56
  • 30.56
  • 30.43
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.48
  • 23.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061000.

Cross-references

EnsemblENSDARG00000061000 (klhdc8a)
ZFINZDB-GENE-120810-3 (klhdc8a)
Uniprot/SPTREMBLE7FFI7, E7FFI7_DANRE

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