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D. rerio Gene: spns2 - ENSDARG00000061017 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061017
Namespns2
Descriptionspinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
OrganismDanio rerio (zebrafish)
Synonym(s)b9a1t2, f1re80, fi20h04, si:dkey-7b17.4, toh, wu:fi20h04
Orthologs(s)15 orthologs
Paralog(s)32 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e3
  • 1.10e3
96.32
  • 96.32
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.87
  • 94.87
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.45
  • 88.45
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.70e3
  • 3.70e3
  • 5.36e3
87.61
  • 87.61
  • 82.04
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.58e3
  • 4.58e3
  • 5.72e3
84.68
  • 84.68
  • 80.86
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
83.08
  • 83.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.09e3
  • 5.09e3
  • 1.42e4
82.96
  • 82.96
  • 52.61
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
6.50e3
  • 6.50e3
  • 1.18e4
78.25
  • 78.25
  • 60.43
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.58e3
  • 6.58e3
  • 1.11e4
77.97
  • 77.97
  • 62.70
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:00072368 cell stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
  • 1.15e4
  • 1.20e4
  • 1.21e4
  • 1.22e4
  • 1.23e4
  • 1.24e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.31e4
  • 1.49e4
77.27
  • 77.27
  • 61.49
  • 59.92
  • 59.48
  • 59.03
  • 58.81
  • 58.56
  • 57.89
  • 57.87
  • 57.84
  • 57.72
  • 57.11
  • 57.06
  • 56.28
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
6.83e3
  • 6.83e3
  • 9.62e3
  • 1.26e4
  • 1.27e4
  • 1.31e4
  • 1.32e4
77.14
  • 77.14
  • 67.79
  • 57.71
  • 57.32
  • 56.11
  • 55.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
7.32e3
  • 7.32e3
  • 8.29e3
  • 8.34e3
  • 8.72e3
  • 8.80e3
  • 1.32e4
  • 1.35e4
  • 1.36e4
  • 1.42e4
75.48
  • 75.48
  • 72.26
  • 72.09
  • 70.82
  • 70.55
  • 55.66
  • 54.69
  • 54.37
  • 52.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000084yolk
  • ZFS:0000019Gastrula:Shield
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.58
  • 68.58
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.42e3
  • 9.42e3
68.47
  • 68.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0002349myocardium
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.05e4
  • 1.07e4
66.65
  • 66.65
  • 65.37
  • 64.69
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.01e4
  • 1.01e4
  • 1.23e4
  • 1.46e4
66.20
  • 66.20
  • 58.66
  • 51.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.21e4
  • 1.21e4
  • 1.37e4
59.40
  • 59.40
  • 54.29
AEIR
  • AEIR
  • AEIR
UBERON:0003061blood island
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
ZFA:0000541marginal blastomere (Danio)
  • ZFS:0000015Blastula:Dome
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.37e4
  • 1.37e4
  • 1.39e4
54.13
  • 54.13
  • 53.41
AEIR
  • AEIR
  • AEIR
UBERON:0004291heart rudiment
  • ZFS:0000027Segmentation:20-25 somites
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0004750blastoderm
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004749blastodisc
  • ZFS:0000014Blastula:Sphere
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.47
  • 49.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.05
  • 47.05
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.56
  • 45.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.14e4
  • 2.14e4
28.42
  • 28.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Cross-references

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