D. rerio Gene: abcg4a - ENSDARG00000061047 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061047
Nameabcg4a
DescriptionATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
OrganismDanio rerio (zebrafish)
Synonym(s)abcg1a, abcg4, si:ch211-117m20.3
Orthologs(s)17 orthologs
Paralog(s)33 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.31e3
  • 7.31e3
75.52
  • 75.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.38e3
  • 9.38e3
  • 1.62e4
68.60
  • 68.60
  • 45.81
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.47e3
  • 9.47e3
68.28
  • 68.28
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.52e4
  • 1.52e4
  • 1.98e4
  • 1.99e4
  • 2.23e4
  • 2.33e4
49.25
  • 49.25
  • 33.71
  • 33.34
  • 25.28
  • 21.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.61
  • 48.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.59
  • 43.59
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
42.19
  • 42.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.81
  • 39.81
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 2.06e4
39.51
  • 39.51
  • 31.07
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.17
  • 39.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.75
  • 28.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSDARG00000061047 (abcg4a)
ZFINZDB-GENE-050517-39 (abcg4a)
EMBLBX294376
Uniprot/SPTREMBLA2BFT1, A2BFT1_DANRE

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