D. rerio Gene: nipblb - ENSDARG00000061052 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061052
Namenipblb
Descriptionnipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
OrganismDanio rerio (zebrafish)
Synonym(s)a1l2b2, f5hse2, nipbl, nipbla, wu:fi33d08
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.26e3
  • 2.26e3
92.44
  • 92.44
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.50e3
  • 2.50e3
  • 2.88e3
  • 6.20e3
  • 1.07e4
91.64
  • 91.64
  • 90.35
  • 79.24
  • 64.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.33e3
  • 3.33e3
88.86
  • 88.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000109gastrula stage
3.43e3
  • 3.43e3
  • 3.60e3
  • 3.73e3
  • 4.46e3
  • 5.03e3
  • 5.11e3
  • 5.27e3
  • 5.63e3
  • 5.74e3
  • 5.78e3
  • 7.53e3
  • 8.62e3
  • 9.04e3
  • 9.08e3
  • 1.41e4
  • 1.47e4
  • 1.49e4
88.52
  • 88.52
  • 87.94
  • 87.52
  • 85.07
  • 83.17
  • 82.89
  • 82.35
  • 81.14
  • 80.79
  • 80.64
  • 74.78
  • 71.14
  • 69.74
  • 69.59
  • 52.86
  • 50.68
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.51e3
  • 3.51e3
  • 3.68e3
  • 4.39e3
  • 4.59e3
  • 5.08e3
  • 5.72e3
88.25
  • 88.25
  • 87.69
  • 85.30
  • 84.63
  • 82.98
  • 80.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
3.61e3
  • 3.61e3
  • 3.73e3
  • 3.88e3
  • 6.25e3
  • 6.68e3
  • 7.26e3
  • 7.51e3
  • 8.71e3
  • 8.90e3
  • 9.14e3
87.92
  • 87.92
  • 87.52
  • 87.00
  • 79.08
  • 77.64
  • 75.69
  • 74.86
  • 70.84
  • 70.21
  • 69.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.58e3
  • 4.58e3
  • 5.94e3
  • 5.99e3
  • 8.93e3
  • 9.09e3
84.68
  • 84.68
  • 80.10
  • 79.93
  • 70.09
  • 69.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
  • 1.50e4
83.84
  • 83.84
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
  • 1.11e4
81.14
  • 81.14
  • 62.76
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.27e3
  • 6.27e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.40
  • 78.40
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.54
  • 77.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.59
  • 76.59
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.19e3
  • 7.19e3
75.93
  • 75.93
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
  • 7.58e3
75.30
  • 75.30
  • 74.64
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.35
  • 74.35
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
74.05
  • 74.05
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
  • 8.97e3
73.98
  • 73.98
  • 69.97
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.60
  • 73.60
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.20e3
  • 8.20e3
  • 8.97e3
  • 1.03e4
72.53
  • 72.53
  • 69.96
  • 65.62
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.20e3
  • 9.20e3
69.21
  • 69.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.36e3
  • 9.36e3
68.66
  • 68.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.13
  • 68.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.21
  • 63.21
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.86
  • 62.86
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
1.18e4
  • 1.18e4
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0005507rhombomere 3
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061052.

Cross-references

EnsemblENSDARG00000061052 (nipblb)
ZFINZDB-GENE-030131-6070 (nipblb)
EMBLAB630365, AL929053, BC129432, BX548163
Uniprot/SWISSPROTF1QBY1, NIPLB_DANRE

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