D. rerio Gene: gtpbp6 - ENSDARG00000061091 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061091
Namegtpbp6
DescriptionGTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
OrganismDanio rerio (zebrafish)
Synonym(s)fc56b07, wu:fc56b07, wu:fl82e09
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.19
  • 77.19
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.78e3
  • 8.78e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.84e3
  • 8.84e3
  • 1.42e4
70.39
  • 70.39
  • 52.33
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.39
  • 66.39
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
  • 1.50e4
65.07
  • 65.07
  • 49.74
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.28e4
  • 1.47e4
  • 1.48e4
  • 1.79e4
64.26
  • 64.26
  • 57.07
  • 50.73
  • 50.39
  • 39.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.91
  • 63.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.82
  • 61.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.48
  • 61.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.17e4
  • 1.17e4
  • 1.22e4
60.86
  • 60.86
  • 59.14
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.46
  • 60.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
60.33
  • 60.33
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.23e4
  • 1.23e4
  • 1.28e4
58.73
  • 58.73
  • 57.00
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.71e4
57.75
  • 57.75
  • 42.91
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.36
  • 57.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.71
  • 56.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
55.89
  • 55.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.32
  • 54.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.71
  • 53.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.54
  • 51.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi13 species14 genesCompare expression
Bilateria20 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061091.

Cross-references

EnsemblENSDARG00000061091 (gtpbp6)
ZFINZDB-GENE-031118-62 (gtpbp6)
EMBLBX323016, BX324166
Uniprot/SPTREMBLF1R368, F1R368_DANRE, X1WE07, X1WE07_DANRE

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