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D. rerio Gene: slc43a2b - ENSDARG00000061120 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061120
Nameslc43a2b
Descriptionsolute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
OrganismDanio rerio (zebrafish)
Synonym(s)cb941, wu:fb37c04, wu:fb38e03, wu:fb52a10, wu:fi32b04, xx:lithzf000079, zgc:103664
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
462
  • 462
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
490
  • 490
  • 913
  • 962
  • 1.21e3
  • 1.26e3
  • 1.58e3
  • 1.69e3
  • 1.73e3
  • 3.62e3
  • 4.50e3
98.36
  • 98.36
  • 96.95
  • 96.78
  • 95.95
  • 95.80
  • 94.72
  • 94.34
  • 94.22
  • 87.87
  • 84.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
782
  • 782
  • 1.35e3
  • 2.57e3
  • 2.97e3
  • 3.20e3
  • 5.81e3
97.39
  • 97.39
  • 95.48
  • 91.39
  • 90.05
  • 89.28
  • 80.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.53e3
  • 1.53e3
  • 1.71e3
  • 3.14e3
94.87
  • 94.87
  • 94.28
  • 89.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
1.71e3
  • 1.71e3
  • 1.72e3
  • 1.94e3
  • 2.09e3
  • 2.19e3
  • 2.23e3
  • 2.24e3
  • 2.37e3
  • 3.12e3
  • 3.83e3
  • 3.87e3
  • 4.49e3
  • 5.91e3
94.27
  • 94.27
  • 94.25
  • 93.52
  • 92.99
  • 92.65
  • 92.55
  • 92.49
  • 92.07
  • 89.57
  • 87.16
  • 87.03
  • 84.97
  • 80.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.99e3
  • 1.99e3
  • 1.17e4
93.34
  • 93.34
  • 60.95
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.55
  • 92.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.25
  • 90.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.67
  • 80.67
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
  • 9.94e3
80.48
  • 80.48
  • 66.72
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
5.93e3
  • 5.93e3
  • 7.85e3
  • 1.22e4
80.14
  • 80.14
  • 73.73
  • 59.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.02
  • 80.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
79.75
  • 79.75
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
6.40e3
  • 6.40e3
  • 6.40e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.91e3
  • 7.97e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 1.05e4
  • 1.05e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
78.57
  • 78.57
  • 78.57
  • 75.00
  • 74.99
  • 73.52
  • 73.52
  • 73.32
  • 69.99
  • 69.99
  • 69.99
  • 64.69
  • 64.69
  • 58.80
  • 57.68
  • 57.13
  • 57.13
  • 57.13
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.31e3
  • 7.31e3
  • 1.57e4
75.52
  • 75.52
  • 47.34
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.53e3
  • 8.53e3
  • 9.67e3
  • 1.05e4
71.43
  • 71.43
  • 67.63
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
  • 1.25e4
70.30
  • 70.30
  • 58.28
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.01e4
  • 1.01e4
66.07
  • 66.07
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
  • 1.13e4
63.11
  • 63.11
  • 62.29
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.12e4
  • 1.12e4
  • 1.16e4
62.48
  • 62.48
  • 61.09
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.80
  • 59.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.16
  • 58.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.43
  • 57.43
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.46
  • 44.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
43.01
  • 43.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.01
  • 38.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata3 genesCompare expression
Bilateria5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061120.

Cross-references

EnsemblENSDARG00000061120 (slc43a2b)
ZFINZDB-GENE-041212-6 (slc43a2b)
EMBLCT573163, CU467963
Uniprot/SPTREMBLE9QGE5, E9QGE5_DANRE, F1QCB3, F1QCB3_DANRE

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