Gene: tinagl1 - ENSDARG00000061231 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000061231
Name	tinagl1
Description	tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
Organism	Danio rerio (zebrafish)
Synonym(s)	lcn7, lipocalin-7, si:dkey-158b13.1
Orthologs(s)	25 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.24e3 3.24e3	89.15 89.15	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	3.32e3 3.32e3	88.88 88.88	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	3.33e3 3.33e3	88.84 88.84	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	4.16e3 4.16e3 1.92e4	86.08 86.08 35.87	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	4.31e3 4.31e3 8.37e3 9.94e3 1.04e4 1.51e4	85.58 85.58 71.98 66.73 65.28 49.35	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	5.54e3 5.54e3	81.45 81.45	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	5.71e3 5.71e3	80.90 80.90	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	5.92e3 5.92e3 6.67e3	80.19 80.19 77.67	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	6.19e3 6.19e3	79.29 79.29	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	7.24e3 7.24e3	75.75 75.75	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.61e3 7.61e3	74.51 74.51	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	8.55e3 8.55e3	71.38 71.38	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	8.74e3 8.74e3	70.73 70.73	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	8.96e3 8.96e3	70.00 70.00	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.96e3 8.96e3	69.98 69.98	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.11e4 1.11e4	62.96 62.96	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.31e4 1.31e4	56.08 56.08	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.35e4 1.35e4	54.94 54.94	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.35e4 1.35e4	54.85 54.85	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.88 53.88	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.52e4 1.52e4 1.74e4	49.00 49.00 41.59	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	46.22 46.22	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000142910 TINAGL1 ENSMUSG00000028776 Tinagl1 ENSPTRG00000000461 TINAGL1 ENSGGOG00000015888 TINAGL1 ENSMMUG00000022779 TINAGL1 ENSRNOG00000013179 Tinagl1 ENSBTAG00000013235 TINAGL1 ENSSSCG00000003600 TINAGL1 ENSECAG00000014247 TINAGL1 ENSOCUG00000023359 TINAGL1 ENSCAFG00000011002 TINAGL1 ENSFCAG00000015664 TINAGL1 ENSCPOG00000022228 TINAGL1 ENSEEUG00000014865 TINAGL1 ENSMODG00000028729 TINAGL1 ENSGALG00000017715 TINAGL1 ENSACAG00000012412 TINAGL1 ENSXETG00000017634 tinagl1	Compare expression	[+]
Bilateria	25 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	25 genes ENSG00000142910 TINAGL1 ENSMUSG00000028776 Tinagl1 FBgn0034709 Swim WBGene00009158 F26E4.3 ENSPTRG00000000461 TINAGL1 ENSGGOG00000015888 TINAGL1 ENSMMUG00000022779 TINAGL1 ENSRNOG00000013179 Tinagl1 ENSBTAG00000013235 TINAGL1 ENSSSCG00000003600 TINAGL1 ENSECAG00000014247 TINAGL1 ENSOCUG00000023359 TINAGL1 ENSCAFG00000011002 TINAGL1 ENSFCAG00000015664 TINAGL1 ENSCPOG00000022228 TINAGL1 ENSEEUG00000014865 TINAGL1 ENSMODG00000028729 TINAGL1 ENSGALG00000017715 TINAGL1 ENSACAG00000012412 TINAGL1 ENSXETG00000017634 tinagl1 FBgn0089364 GF12327 FBgn0141778 GI19039 FBgn0196453 GD25141 FBgn0207147 GJ20006 FBgn0229489 GE11695	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000061231.

Cross-references

Ensembl	ENSDARG00000061231 (tinagl1)
ZFIN	ZDB-GENE-060503-240 (tinagl1)
EMBL	BX950864
Uniprot/SPTREMBL	Q1LUC6, Q1LUC6_DANRE