D. rerio Gene: arhgap5 - ENSDARG00000061294 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061294
Namearhgap5
DescriptionRho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.74e3
  • 1.74e3
94.17
  • 94.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.47e3
  • 2.47e3
  • 4.26e3
  • 5.06e3
  • 5.35e3
  • 5.60e3
91.73
  • 91.73
  • 85.74
  • 83.05
  • 82.07
  • 81.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.52e3
  • 3.52e3
  • 6.42e3
88.23
  • 88.23
  • 78.49
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.25e3
  • 4.25e3
  • 1.49e4
85.78
  • 85.78
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.36e3
  • 4.36e3
  • 5.60e3
85.42
  • 85.42
  • 81.26
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.73e3
  • 4.73e3
84.15
  • 84.15
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
  • 6.25e3
81.75
  • 81.75
  • 79.07
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.28
  • 79.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.29e3
  • 6.29e3
  • 8.22e3
78.94
  • 78.94
  • 72.48
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.44e3
  • 6.44e3
78.43
  • 78.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.51e3
  • 6.51e3
  • 7.82e3
78.21
  • 78.21
  • 73.82
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.62
  • 77.62
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
  • 8.75e3
  • 1.14e4
  • 1.16e4
  • 1.47e4
  • 1.50e4
77.26
  • 77.26
  • 70.71
  • 61.70
  • 61.10
  • 50.90
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.12e3
  • 7.12e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.34
  • 72.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.90
  • 71.90
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.07
  • 69.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.15
  • 65.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061294.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061294.

Cross-references

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