D. rerio Gene: galnt1 - ENSDARG00000061335 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061335
Namegalnt1
DescriptionUDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
OrganismDanio rerio (zebrafish)
Synonym(s)fc05g08, si:ch211-194b7.3, wu:fc05g08
Orthologs(s)26 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
  • 5.26e3
95.27
  • 95.27
  • 82.38
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
1.73e3
  • 1.73e3
  • 3.54e3
  • 5.23e3
  • 7.40e3
94.21
  • 94.21
  • 88.14
  • 82.49
  • 75.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.90e3
  • 2.90e3
90.29
  • 90.29
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.10e3
  • 3.10e3
89.61
  • 89.61
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
3.13e3
  • 3.13e3
  • 3.78e3
  • 3.91e3
  • 4.30e3
  • 4.83e3
  • 5.32e3
  • 5.92e3
  • 6.05e3
  • 8.29e3
  • 9.50e3
  • 9.62e3
  • 9.97e3
  • 1.02e4
  • 1.17e4
89.53
  • 89.53
  • 87.33
  • 86.90
  • 85.60
  • 83.85
  • 82.19
  • 80.16
  • 79.73
  • 72.24
  • 68.20
  • 67.78
  • 66.62
  • 65.76
  • 60.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.19e3
  • 3.19e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
3.55e3
  • 3.55e3
  • 5.38e3
  • 5.69e3
  • 6.18e3
  • 6.52e3
  • 6.67e3
  • 6.78e3
  • 7.14e3
  • 7.98e3
  • 8.72e3
88.11
  • 88.11
  • 81.99
  • 80.95
  • 79.32
  • 78.17
  • 77.67
  • 77.30
  • 76.11
  • 73.28
  • 70.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.63e3
  • 3.63e3
87.86
  • 87.86
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.04e3
  • 4.04e3
  • 5.95e3
  • 7.27e3
86.47
  • 86.47
  • 80.08
  • 75.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.47e3
  • 4.47e3
85.03
  • 85.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.99e3
  • 4.99e3
  • 5.37e3
83.30
  • 83.30
  • 82.04
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.16
  • 83.16
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
  • 5.33e3
82.64
  • 82.64
  • 82.16
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.95
  • 81.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.78e3
  • 5.78e3
  • 6.05e3
80.65
  • 80.65
  • 79.75
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.85
  • 76.85
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.60
  • 74.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.51
  • 74.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.89e3
  • 7.89e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
69.32
  • 69.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
68.99
  • 68.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.07
  • 68.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.00e4
  • 1.00e4
  • 1.02e4
  • 1.05e4
  • 1.10e4
  • 1.30e4
66.46
  • 66.46
  • 66.00
  • 64.96
  • 63.17
  • 56.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.04e4
  • 1.04e4
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
1.15e4
  • 1.15e4
  • 1.20e4
  • 1.23e4
  • 1.24e4
  • 1.41e4
61.58
  • 61.58
  • 59.80
  • 58.79
  • 58.57
  • 52.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.18e4
  • 1.18e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.04
  • 57.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061335.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061335.

Cross-references

EnsemblENSDARG00000061335 (galnt1)
ZFINZDB-GENE-030131-2360 (galnt1)
EMBLBX548254, CR391952
Uniprot/SPTREMBLE7FDA0, E7FDA0_DANRE

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