Gene: aoc1 - ENSDARG00000061355 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000061355
Name	aoc1
Description	amine oxidase, copper containing 1 [Source:ZFIN;Acc:ZDB-GENE-061103-112]
Organism	Danio rerio (zebrafish)
Synonym(s)	abp1, abp1 {eco:0000313\|embl:aai25957.1,gn eco:0000313\|zfin:zdb-gene-061103-112}, amiloride binding protein 1, dao, diamine oxidase, histaminase, si:ch211-286c5.2, zgc:154101
Orthologs(s)	24 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	328 328	98.91 98.91	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	3.79e3 3.79e3	87.31 87.31	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 6 stages ZFS:0000040Larval:Days 14-20 ZFS:0000042Juvenile:Days 30-44 ZFS:0000037Larval:Day 5 ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage ZFS:0000033Hatching:Long-pec	4.01e3 4.01e3 5.85e3 9.19e3 1.08e4 1.30e4 1.81e4	86.59 86.59 80.43 69.22 63.81 56.36 39.42	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 3 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage ZFS:0000035Larval:Protruding-mouth	4.73e3 4.73e3 1.29e4 1.48e4	84.17 84.17 56.73 50.56	AEIR AEIR AEIR AEIR
ZFA:0000302	ventral habenular nucleus (Danio)	[+] 2 stages ZFS:0000036Larval:Day 4 ZFS:0000033Hatching:Long-pec	4.98e3 4.98e3 1.49e4	83.34 83.34 50.00	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	6.73e3 6.73e3	77.45 77.45	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	9.96e3 9.96e3 1.69e4	66.65 66.65 43.54	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.11 66.11	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.02e4 1.02e4	65.84 65.84	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.29e4 1.29e4	56.74 56.74	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.32e4 1.32e4	55.89 55.89	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.51e4 1.51e4	49.41 49.41	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.66e4 1.66e4	44.41 44.41	AEIR AEIR
UBERON:0002199	integument	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.77 40.77	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.96e4 1.96e4	34.30 34.30	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.11e4 2.11e4	29.49 29.49	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	24 genes ENSG00000002726 AOC1 ENSMUSG00000029811 Aoc1 ENSMUSG00000029813 1600015I10Rik ENSMUSG00000039215 Svs1 ENSMUSG00000068536 Doxl2 ENSPTRG00000019866 AOC1 ENSGGOG00000002416 AOC1 ENSMMUG00000020435 AOC1 ENSRNOG00000008575 Aoc1 ENSRNOG00000008714 Svs1 ENSRNOG00000023612 Doxl1 ENSRNOG00000032432 Doxl2 ENSBTAG00000005419 AOC1 ENSSSCG00000016442 AOC1 ENSECAG00000022759 AOC1 ENSOCUG00000014731 AOC1 ENSCAFG00000004665 AOC1 ENSFCAG00000031201 AOC1 ENSCPOG00000007933 AOC1 ENSEEUG00000007924 AOC1 ENSMODG00000003706 AOC1 ENSOANG00000012268 AOC1 ENSGALG00000028939 AOC1 ENSXETG00000011988 aoc1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000061355.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	1 gene ENSDARG00000014646 aoc2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000061355.

Cross-references

Ensembl	ENSDARG00000061355 (aoc1)
ZFIN	ZDB-GENE-061103-112 (aoc1)
EMBL	BC125956, BX323854
Uniprot/SPTREMBL	A0JMP5, A0JMP5_DANRE