D. rerio Gene: cog7 - ENSDARG00000061372 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061372
Namecog7
Descriptioncomponent of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:152912, zgc:153470
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.64
  • 87.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
3.98e3
  • 3.98e3
  • 4.64e3
  • 1.52e4
86.66
  • 86.66
  • 84.46
  • 49.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
4.11e3
  • 4.11e3
  • 7.57e3
  • 1.48e4
86.24
  • 86.24
  • 74.65
  • 50.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.78
  • 84.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.68
  • 84.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.03
  • 84.03
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.79
  • 83.79
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.20e3
  • 5.20e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.07
  • 82.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.42e3
  • 5.42e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.81
  • 80.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.19
  • 80.19
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.95e3
  • 5.95e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
5.98e3
  • 5.98e3
  • 6.76e3
  • 7.81e3
  • 8.52e3
  • 1.07e4
79.99
  • 79.99
  • 77.35
  • 73.85
  • 71.48
  • 64.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
  • 6.87e3
79.29
  • 79.29
  • 76.99
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.23e3
  • 6.23e3
79.13
  • 79.13
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.09
  • 79.09
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.73
  • 76.73
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
  • 8.24e3
75.01
  • 75.01
  • 72.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.15
  • 73.15
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.63e3
  • 9.63e3
  • 1.40e4
  • 1.76e4
67.76
  • 67.76
  • 53.13
  • 41.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061372.

Cross-references

EnsemblENSDARG00000061372 (cog7)
ZFINZDB-GENE-061013-463 (cog7)
Uniprot/SPTREMBLF1RBH5, F1RBH5_DANRE

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