D. rerio Gene: sgpl1 - ENSDARG00000061375 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061375
Namesgpl1
Descriptionsphingosine-1-phosphate lyase 1 [Source:ZFIN;Acc:ZDB-GENE-070410-24]
OrganismDanio rerio (zebrafish)
Synonym(s)spl, zgc:162153
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
714
  • 714
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.25e3
  • 1.25e3
  • 4.83e3
95.82
  • 95.82
  • 83.83
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.79
  • 95.79
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.71e3
  • 1.71e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 5.43e3
  • 9.13e3
  • 9.96e3
  • 1.46e4
  • 1.48e4
  • 1.50e4
92.65
  • 92.65
  • 81.81
  • 69.43
  • 66.66
  • 51.12
  • 50.61
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.25
  • 92.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.38e3
  • 2.38e3
  • 4.11e3
  • 5.53e3
  • 6.46e3
  • 6.83e3
92.02
  • 92.02
  • 86.23
  • 81.50
  • 78.39
  • 77.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.83e3
  • 2.83e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.35
  • 86.35
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.26e3
  • 4.26e3
85.75
  • 85.75
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.68e3
  • 4.68e3
  • 9.70e3
84.35
  • 84.35
  • 67.51
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.29
  • 84.29
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.36
  • 83.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.53e3
  • 5.53e3
  • 6.35e3
81.47
  • 81.47
  • 78.73
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.65e3
  • 5.65e3
  • 9.03e3
81.09
  • 81.09
  • 69.76
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.34
  • 74.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.14e3
  • 8.14e3
72.75
  • 72.75
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
71.51
  • 71.51
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.66e3
  • 8.66e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.70e3
  • 8.70e3
  • 9.29e3
70.86
  • 70.86
  • 68.89
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061375.

Cross-references

EnsemblENSDARG00000061375 (sgpl1)
ZFINZDB-GENE-070410-24 (sgpl1)
EMBLBC139528, BX663512
Uniprot/SPTREMBLA4QNU7, A4QNU7_DANRE, F1R912, F1R912_DANRE

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