D. rerio Gene: trip12 - ENSDARG00000061397 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061397
Nametrip12
Descriptionthyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
OrganismDanio rerio (zebrafish)
Synonym(s)a3kpn5, im:7149446, si:ch211-272f3.4, trip-12
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
379
  • 379
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
607
  • 607
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.44e3
  • 1.44e3
  • 2.79e3
  • 3.09e3
  • 4.96e3
  • 5.04e3
  • 1.13e4
  • 1.31e4
  • 1.33e4
95.17
  • 95.17
  • 90.66
  • 89.67
  • 83.39
  • 83.12
  • 62.16
  • 56.19
  • 55.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
  • 5.23e3
94.45
  • 94.45
  • 82.50
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.59
  • 91.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.33
  • 91.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
2.69e3
  • 2.69e3
  • 3.51e3
  • 1.24e4
  • 1.25e4
91.01
  • 91.01
  • 88.27
  • 58.47
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.79e3
  • 2.79e3
  • 3.73e3
  • 1.10e4
  • 1.18e4
  • 1.19e4
  • 1.23e4
90.67
  • 90.67
  • 87.51
  • 63.03
  • 60.38
  • 60.06
  • 58.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.83e3
  • 2.83e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.70
  • 89.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.61
  • 89.61
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.29e3
  • 3.29e3
  • 4.77e3
88.98
  • 88.98
  • 84.02
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.47e3
  • 4.47e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
4.98e3
  • 4.98e3
  • 5.97e3
  • 6.22e3
  • 6.54e3
  • 6.64e3
  • 6.97e3
  • 7.03e3
  • 7.91e3
  • 1.11e4
  • 1.12e4
  • 1.13e4
  • 1.17e4
  • 1.19e4
  • 1.19e4
  • 1.23e4
  • 1.30e4
  • 1.30e4
  • 1.30e4
  • 1.37e4
  • 1.40e4
  • 1.45e4
83.33
  • 83.33
  • 80.00
  • 79.16
  • 78.12
  • 77.77
  • 76.66
  • 76.46
  • 73.52
  • 62.92
  • 62.59
  • 62.18
  • 60.66
  • 60.28
  • 60.21
  • 58.97
  • 56.57
  • 56.55
  • 56.43
  • 54.18
  • 53.00
  • 51.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.45e3
  • 5.45e3
  • 1.62e4
81.74
  • 81.74
  • 45.91
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.34
  • 81.34
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.03e3
  • 6.03e3
  • 1.19e4
  • 1.47e4
79.82
  • 79.82
  • 60.18
  • 50.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.30
  • 78.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.41
  • 77.41
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.99
  • 64.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061397.

Cross-references

EnsemblENSDARG00000061397 (trip12)
ZFINZDB-GENE-041111-262 (trip12)
EMBLBX255887, CU928079
Uniprot/SPTREMBLE9QHK4, E9QHK4_DANRE, F1Q529, F1Q529_DANRE
Uniprot/SWISSPROTF1RCR6, TRIPC_DANRE

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