We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: ncaph - ENSDARG00000061468 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061468
Namencaph
Descriptionnon-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-86b9.4, zgc:158618
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
356
  • 356
  • 653
  • 1.29e3
  • 1.43e3
  • 2.61e3
98.81
  • 98.81
  • 97.82
  • 95.68
  • 95.20
  • 91.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
801
  • 801
97.32
  • 97.32
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
838
  • 838
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.38e3
  • 1.38e3
  • 2.37e3
  • 2.51e3
  • 2.73e3
  • 3.03e3
  • 3.69e3
95.39
  • 95.39
  • 92.07
  • 91.60
  • 90.86
  • 89.85
  • 87.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.72e3
  • 1.72e3
  • 4.58e3
  • 9.57e3
94.25
  • 94.25
  • 84.66
  • 67.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.09e3
  • 2.09e3
  • 2.70e3
  • 3.42e3
  • 3.70e3
  • 4.17e3
  • 4.27e3
  • 5.24e3
  • 5.77e3
  • 5.81e3
  • 5.86e3
  • 6.79e3
  • 8.88e3
  • 1.19e4
  • 1.26e4
  • 1.31e4
  • 1.32e4
  • 1.38e4
  • 1.47e4
  • 1.50e4
92.99
  • 92.99
  • 90.97
  • 88.55
  • 87.62
  • 86.05
  • 85.71
  • 82.44
  • 80.70
  • 80.56
  • 80.37
  • 77.27
  • 70.27
  • 60.01
  • 57.82
  • 56.17
  • 55.93
  • 53.74
  • 50.90
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
2.46e3
  • 2.46e3
  • 3.16e3
  • 3.66e3
  • 3.72e3
  • 4.66e3
  • 5.00e3
  • 5.88e3
  • 6.15e3
  • 8.40e3
  • 9.76e3
91.78
  • 91.78
  • 89.43
  • 87.76
  • 87.53
  • 84.41
  • 83.26
  • 80.32
  • 79.42
  • 71.87
  • 67.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.74
  • 90.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.46
  • 90.46
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.02e3
  • 3.02e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.52e3
  • 3.52e3
88.23
  • 88.23
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.75e3
  • 3.75e3
87.45
  • 87.45
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.18e3
  • 4.18e3
86.02
  • 86.02
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
  • 1.70e4
83.70
  • 83.70
  • 43.12
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.66
  • 82.66
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.77e3
  • 5.77e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
  • 1.34e4
  • 1.89e4
77.67
  • 77.67
  • 54.99
  • 36.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.84e3
  • 6.84e3
77.09
  • 77.09
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
  • 2.12e4
77.01
  • 77.01
  • 28.92
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.91
  • 67.91
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.82
  • 63.82
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.11e4
  • 1.11e4
  • 1.17e4
  • 1.26e4
62.82
  • 62.82
  • 60.99
  • 57.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.38e4
62.32
  • 62.32
  • 53.93
AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.16e4
  • 1.16e4
61.04
  • 61.04
AEIR
  • AEIR
UBERON:0003065ciliary marginal zone
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.04
  • 55.04
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.01
  • 45.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.77
  • 38.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061468.

Cross-references

EnsemblENSDARG00000061468 (ncaph)
ZFINZDB-GENE-070112-652 (ncaph)
EMBLBX323557
Uniprot/SPTREMBLA2BG39, A2BG39_DANRE

Do not show this banner again