D. rerio Gene: u2surp - ENSDARG00000061490 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061490
Nameu2surp
DescriptionU2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
OrganismDanio rerio (zebrafish)
Synonym(s)mp:zf637-1-000918, si:dkey-181m9.9, wu:fa03e02, wu:fb38b01, wu:fc75d03
Orthologs(s)27 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.40e3
  • 1.40e3
  • 1.94e3
  • 2.08e3
  • 2.33e3
  • 3.32e3
  • 3.40e3
  • 3.48e3
  • 4.24e3
  • 4.87e3
  • 5.56e3
95.31
  • 95.31
  • 93.51
  • 93.03
  • 92.19
  • 88.90
  • 88.62
  • 88.34
  • 85.80
  • 83.71
  • 81.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
  • 3.13e3
  • 3.30e3
  • 6.82e3
94.72
  • 94.72
  • 89.51
  • 88.96
  • 77.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
  • 1.88e3
94.54
  • 94.54
  • 93.70
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.65e3
  • 1.65e3
  • 4.38e3
94.49
  • 94.49
  • 85.32
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.70e3
  • 1.70e3
94.32
  • 94.32
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.18
  • 94.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.95
  • 93.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.88e3
  • 1.88e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 2.07e3
  • 2.22e3
  • 2.25e3
  • 2.46e3
  • 2.59e3
  • 2.94e3
  • 2.95e3
  • 3.01e3
  • 3.34e3
  • 3.47e3
  • 3.83e3
  • 3.93e3
  • 4.83e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.54e3
  • 8.96e3
  • 8.96e3
  • 1.40e4
  • 1.45e4
  • 1.45e4
  • 1.47e4
93.42
  • 93.42
  • 93.07
  • 92.58
  • 92.48
  • 91.77
  • 91.34
  • 90.17
  • 90.12
  • 89.94
  • 88.83
  • 88.39
  • 87.18
  • 86.86
  • 83.82
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 71.42
  • 69.99
  • 69.99
  • 53.03
  • 51.56
  • 51.51
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.04e3
  • 2.04e3
93.17
  • 93.17
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.09e3
  • 2.09e3
  • 2.47e3
  • 2.65e3
  • 2.80e3
  • 3.34e3
  • 3.50e3
93.00
  • 93.00
  • 91.74
  • 91.12
  • 90.62
  • 88.82
  • 88.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.31e3
  • 2.31e3
  • 3.31e3
  • 4.54e3
  • 7.91e3
  • 8.33e3
92.28
  • 92.28
  • 88.93
  • 84.80
  • 73.52
  • 72.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.37e3
  • 2.37e3
92.05
  • 92.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.06e3
  • 3.06e3
  • 3.08e3
89.77
  • 89.77
  • 89.70
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.14e3
  • 3.14e3
89.47
  • 89.47
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.23e3
  • 3.23e3
89.17
  • 89.17
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
3.37e3
  • 3.37e3
  • 4.29e3
  • 5.03e3
88.72
  • 88.72
  • 85.65
  • 83.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.53e3
  • 3.53e3
88.18
  • 88.18
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.66e3
  • 3.66e3
  • 6.47e3
87.76
  • 87.76
  • 78.34
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.43e3
  • 4.43e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.78
  • 84.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.78
  • 82.78
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.99e3
  • 5.99e3
79.95
  • 79.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species20 genesCompare expression
Bilateria26 species27 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061490.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061490.

Cross-references

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